Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 CASC19-246ENST00000641625 1606 ntBASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 RPL32P3-201ENST00000359025 275 ntBASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 RNU6-511P-201ENST00000363496 107 ntBASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 SNORA38B-201ENST00000363524 131 ntBASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 Y_RNA.148-201ENST00000363557 117 ntBASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 RNU6-847P-201ENST00000411115 108 ntBASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 RPS12P24-201ENST00000412619 387 ntBASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 RPL21P133-201ENST00000443666 476 ntBASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 AL161722.1-201ENST00000446972 1032 ntBASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 AC104164.1-201ENST00000460282 590 ntBASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 RPS27P27-201ENST00000498779 255 ntBASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 ZNF519P4-201ENST00000514008 125 ntBASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 AC023442.1-201ENST00000531247 422 ntBASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 AC027026.1-201ENST00000532323 742 ntBASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 CTSLP2-201ENST00000580501 394 ntBASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 MIR4680-201ENST00000580906 66 ntBASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 AC133644.2-201ENST00000608142 540 ntBASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 AL627230.1-201ENST00000613077 211 ntBASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 AC127070.3-201ENST00000503695 3263 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 MAPK10-383ENST00000642032 3390 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 RPL12P13-201ENST00000310055 497 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 Y_RNA.135-201ENST00000363439 95 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 Y_RNA.193-201ENST00000363979 102 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 LCN1P2-201ENST00000372030 223 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 MRPS6P2-201ENST00000381143 370 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 MIR640-201ENST00000385086 96 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 VDAC1P9-201ENST00000412766 841 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 AL591848.1-201ENST00000413092 322 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 RPL12P16-201ENST00000431098 498 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 TVP23CP1-201ENST00000450317 639 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 MRPS31P2-201ENST00000451581 518 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 AL136126.1-201ENST00000473603 402 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 AC079140.5-201ENST00000507882 310 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 SUMO2P7-201ENST00000511179 285 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 RNU6-347P-201ENST00000516658 105 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 RNU6-256P-201ENST00000516747 97 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 RNU6-1137P-201ENST00000517073 99 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 AC018442.3-201ENST00000523025 183 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 CYCSP25-201ENST00000525280 316 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 AC109635.4-202ENST00000531666 412 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 Z82243.1-201ENST00000609432 473 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 AL096712.1-201ENST00000614561 159 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 AC073488.6-201ENST00000632293 754 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 AC235565.1-201ENST00000456962 1325 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 AC009313.2-201ENST00000417893 1941 ntBASIC6.91□□□□□ -1.3
LIMD1Q9UGP4 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms