Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MTATP6P26-201ENST00000445926 662 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 OR52J1P-201ENST00000450596 932 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 AC009220.1-201ENST00000451614 275 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 MTCO3P11-201ENST00000455103 774 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 RPS3AP41-201ENST00000462701 778 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 RPS29P22-201ENST00000472363 168 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 AL136126.1-201ENST00000473603 402 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 NCOR1P1-202ENST00000486162 291 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 RN7SL814P-201ENST00000487715 300 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 AC140172.1-201ENST00000502928 141 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 MTCYBP17-201ENST00000503579 789 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 AC147055.4-201ENST00000504399 745 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 AC097173.1-201ENST00000505862 819 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 AC021193.1-201ENST00000511607 420 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 MRPS33P3-201ENST00000513456 322 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 HIGD1AP3-201ENST00000515857 278 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 PDCD5P1-201ENST00000543528 309 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 UBE2NP1-201ENST00000545592 458 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 NMNAT1P1-201ENST00000554095 876 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 CENPUP2-201ENST00000555897 1186 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 MIR4330-201ENST00000579077 105 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 MIR3936-201ENST00000584304 110 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 AL008729.2-201ENST00000606393 473 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 AC097505.1-201ENST00000610199 565 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 AL627230.1-201ENST00000613077 211 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 AC243773.3-201ENST00000613270 256 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRFN1Q9P244 AC099669.2-201ENST00000616549 437 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 AL591926.8-201ENST00000616876 211 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 AL731566.2-201ENST00000618971 317 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 AC112694.2-201ENST00000623697 768 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRFN1Q9P244 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRFN1Q9P244 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 OR5BR1P-201ENST00000524992 1330 ntBASIC4.69□□□□□ -1.66
LRFN1Q9P244 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
LRFN1Q9P244 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN1Q9P244 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN1Q9P244 AP000526.1-201ENST00000603308 1388 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN1Q9P244 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN1Q9P244 PABPC1P7-201ENST00000413177 1513 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN1Q9P244 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN1Q9P244 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN1Q9P244 AL391994.1-201ENST00000254724 282 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN1Q9P244 AC017079.1-201ENST00000333650 415 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN1Q9P244 MIR141-201ENST00000384975 95 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 ARF4P3-201ENST00000397387 509 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 SNRPEP2-201ENST00000397592 279 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 AL356131.1-201ENST00000405826 414 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 GPS2P1-201ENST00000411761 986 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.68□□□□□ -1.66
LRFN1Q9P244 AC098592.1-201ENST00000419352 333 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 LINC00993-201ENST00000420453 540 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 AL360081.1-201ENST00000428299 555 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 PSMA2P3-201ENST00000429685 675 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.68□□□□□ -1.66
LRFN1Q9P244 RPL34P20-201ENST00000442771 351 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 USP9YP10-201ENST00000454868 628 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.68□□□□□ -1.66
LRFN1Q9P244 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.68□□□□□ -1.66
LRFN1Q9P244 FTH1P2-201ENST00000466086 412 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 RPS15AP17-201ENST00000470598 390 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 RPL21P103-201ENST00000479921 488 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 AC090686.1-201ENST00000481577 749 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.68□□□□□ -1.66
LRFN1Q9P244 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.68□□□□□ -1.66
LRFN1Q9P244 OR51K1P-201ENST00000510214 950 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN1Q9P244 USP9YP5-201ENST00000511770 630 ntBASIC4.68□□□□□ -1.66
LRFN1Q9P244 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms