Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.3□□□□□ -1.72
HPS4Q9NQG7 RNF6P1-201ENST00000444889 1784 ntBASIC4.3□□□□□ -1.72
HPS4Q9NQG7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HPS4Q9NQG7 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HPS4Q9NQG7 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.29□□□□□ -1.72
HPS4Q9NQG7 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.29□□□□□ -1.72
HPS4Q9NQG7 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HPS4Q9NQG7 RNU1-87P-201ENST00000363727 170 ntBASIC4.29□□□□□ -1.72
HPS4Q9NQG7 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HPS4Q9NQG7 CYP4F29P-201ENST00000420685 446 ntBASIC4.29□□□□□ -1.72
HPS4Q9NQG7 HMGB3P5-201ENST00000428894 612 ntBASIC4.29□□□□□ -1.72
HPS4Q9NQG7 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.29□□□□□ -1.72
HPS4Q9NQG7 AL590762.3-201ENST00000436372 640 ntBASIC4.29□□□□□ -1.72
HPS4Q9NQG7 RPL23AP46-201ENST00000438548 490 ntBASIC4.29□□□□□ -1.72
HPS4Q9NQG7 AL121877.1-201ENST00000453704 622 ntBASIC4.29□□□□□ -1.72
HPS4Q9NQG7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.29□□□□□ -1.72
HPS4Q9NQG7 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HPS4Q9NQG7 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HPS4Q9NQG7 HPRT1P2-201ENST00000505250 544 ntBASIC4.29□□□□□ -1.72
HPS4Q9NQG7 AC010468.3-201ENST00000508225 458 ntBASIC4.29□□□□□ -1.72
HPS4Q9NQG7 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.29□□□□□ -1.72
HPS4Q9NQG7 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.29□□□□□ -1.72
HPS4Q9NQG7 MIR4444-1-201ENST00000581696 74 ntBASIC4.29□□□□□ -1.72
HPS4Q9NQG7 MIR4444-2-201ENST00000584390 74 ntBASIC4.29□□□□□ -1.72
HPS4Q9NQG7 BNIP3P22-201ENST00000593399 556 ntBASIC4.29□□□□□ -1.72
HPS4Q9NQG7 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.29□□□□□ -1.72
HPS4Q9NQG7 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.29□□□□□ -1.72
HPS4Q9NQG7 AL139395.1-201ENST00000603662 160 ntBASIC4.29□□□□□ -1.72
HPS4Q9NQG7 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.29□□□□□ -1.72
HPS4Q9NQG7 AP001033.2-201ENST00000609701 1003 ntBASIC4.29□□□□□ -1.72
HPS4Q9NQG7 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.29□□□□□ -1.72
HPS4Q9NQG7 AL138721.1-201ENST00000616756 179 ntBASIC4.29□□□□□ -1.72
HPS4Q9NQG7 AC020923.1-201ENST00000624021 917 ntBASIC4.29□□□□□ -1.72
HPS4Q9NQG7 AL356094.1-201ENST00000624663 1212 ntBASIC4.29□□□□□ -1.72
HPS4Q9NQG7 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HPS4Q9NQG7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HPS4Q9NQG7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HPS4Q9NQG7 CASC19-261ENST00000641853 1638 ntBASIC4.28□□□□□ -1.72
HPS4Q9NQG7 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 FAM91A3P-201ENST00000456826 2544 ntBASIC4.28□□□□□ -1.72
HPS4Q9NQG7 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.28□□□□□ -1.72
HPS4Q9NQG7 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 AC007685.1-201ENST00000329806 452 ntBASIC4.28□□□□□ -1.72
HPS4Q9NQG7 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 SNORD74.4-201ENST00000364129 80 ntBASIC4.28□□□□□ -1.72
HPS4Q9NQG7 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 RN7SKP177-201ENST00000410567 355 ntBASIC4.28□□□□□ -1.72
HPS4Q9NQG7 TATDN1P1-201ENST00000414123 891 ntBASIC4.28□□□□□ -1.72
HPS4Q9NQG7 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 AC073335.1-201ENST00000427776 363 ntBASIC4.28□□□□□ -1.72
HPS4Q9NQG7 AL353093.1-201ENST00000441292 436 ntBASIC4.28□□□□□ -1.72
HPS4Q9NQG7 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 AC069540.1-201ENST00000446320 988 ntBASIC4.28□□□□□ -1.72
HPS4Q9NQG7 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 RPL23AP73-201ENST00000492507 471 ntBASIC4.28□□□□□ -1.72
HPS4Q9NQG7 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 RFPL1S-203ENST00000539579 330 ntBASIC4.28□□□□□ -1.72
HPS4Q9NQG7 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 CYP4A43P-201ENST00000568156 121 ntBASIC4.28□□□□□ -1.72
HPS4Q9NQG7 CCDC58P3-201ENST00000590792 430 ntBASIC4.28□□□□□ -1.72
HPS4Q9NQG7 AC018618.2-201ENST00000604770 446 ntBASIC4.28□□□□□ -1.72
HPS4Q9NQG7 AC011374.2-201ENST00000607135 526 ntBASIC4.28□□□□□ -1.72
HPS4Q9NQG7 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 AC099669.2-201ENST00000616549 437 ntBASIC4.28□□□□□ -1.72
HPS4Q9NQG7 RMST_9.1-201ENST00000619945 193 ntBASIC4.28□□□□□ -1.72
HPS4Q9NQG7 AP003072.4-201ENST00000624580 310 ntBASIC4.28□□□□□ -1.72
HPS4Q9NQG7 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 AC006042.3-201ENST00000454684 1469 ntBASIC4.28□□□□□ -1.72
HPS4Q9NQG7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HPS4Q9NQG7 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
HPS4Q9NQG7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.73
HPS4Q9NQG7 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 AC116667.1-201ENST00000604855 2072 ntBASIC4.27□□□□□ -1.73
HPS4Q9NQG7 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 SNORA62.3-201ENST00000365110 153 ntBASIC4.27□□□□□ -1.73
HPS4Q9NQG7 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 MIR3074-201ENST00000384885 81 ntBASIC4.27□□□□□ -1.73
HPS4Q9NQG7 MIR513A2-201ENST00000385249 127 ntBASIC4.27□□□□□ -1.73
HPS4Q9NQG7 MIR670-201ENST00000390142 98 ntBASIC4.27□□□□□ -1.73
HPS4Q9NQG7 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms