Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CDH13P55290 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDH13P55290 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CDH13P55290 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH13P55290 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CDH13P55290 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH13P55290 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CDH13P55290 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH13P55290 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH13P55290 RNU1-130P-201ENST00000363930 160 ntBASIC4.26□□□□□ -1.73
CDH13P55290 SNORD113.2-201ENST00000364166 89 ntBASIC4.26□□□□□ -1.73
CDH13P55290 RNU6-1293P-201ENST00000384077 107 ntBASIC4.26□□□□□ -1.73
CDH13P55290 SNORA70F-201ENST00000384142 135 ntBASIC4.26□□□□□ -1.73
CDH13P55290 MIR708-201ENST00000390708 88 ntBASIC4.26□□□□□ -1.73
CDH13P55290 GLULP6-201ENST00000399502 913 ntBASIC4.26□□□□□ -1.73
CDH13P55290 GSTA8P-201ENST00000404253 637 ntBASIC4.26□□□□□ -1.73
CDH13P55290 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH13P55290 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH13P55290 AL139095.3-201ENST00000419672 1203 ntBASIC4.26□□□□□ -1.73
CDH13P55290 AC233981.1-201ENST00000423224 461 ntBASIC4.26□□□□□ -1.73
CDH13P55290 MTCO2P23-201ENST00000425216 680 ntBASIC4.26□□□□□ -1.73
CDH13P55290 MTCYBP32-201ENST00000427945 1084 ntBASIC4.26□□□□□ -1.73
CDH13P55290 PRELID3BP10-201ENST00000431957 584 ntBASIC4.26□□□□□ -1.73
CDH13P55290 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH13P55290 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH13P55290 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.26□□□□□ -1.73
CDH13P55290 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH13P55290 HMGB3P6-201ENST00000444896 598 ntBASIC4.26□□□□□ -1.73
CDH13P55290 ABCF2P2-201ENST00000450549 296 ntBASIC4.26□□□□□ -1.73
CDH13P55290 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH13P55290 RN7SL610P-201ENST00000463845 291 ntBASIC4.26□□□□□ -1.73
CDH13P55290 RPL7P22-201ENST00000466005 733 ntBASIC4.26□□□□□ -1.73
CDH13P55290 RPL35AP15-201ENST00000468042 339 ntBASIC4.26□□□□□ -1.73
CDH13P55290 RN7SL354P-201ENST00000469282 294 ntBASIC4.26□□□□□ -1.73
CDH13P55290 AC069528.1-202ENST00000482888 637 ntBASIC4.26□□□□□ -1.73
CDH13P55290 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.26□□□□□ -1.73
CDH13P55290 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CDH13P55290 AC090071.1-201ENST00000507713 644 ntBASIC4.26□□□□□ -1.73
CDH13P55290 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH13P55290 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH13P55290 AC048346.1-201ENST00000510247 144 ntBASIC4.26□□□□□ -1.73
CDH13P55290 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDH13P55290 RNA5SP135-201ENST00000517019 125 ntBASIC4.26□□□□□ -1.73
CDH13P55290 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.26□□□□□ -1.73
CDH13P55290 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH13P55290 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.26□□□□□ -1.73
CDH13P55290 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH13P55290 RN7SL690P-201ENST00000582087 240 ntBASIC4.26□□□□□ -1.73
CDH13P55290 AC022069.1-201ENST00000582910 658 ntBASIC4.26□□□□□ -1.73
CDH13P55290 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.26□□□□□ -1.73
CDH13P55290 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH13P55290 AC067852.4-201ENST00000590314 478 ntBASIC4.26□□□□□ -1.73
CDH13P55290 AL365400.2-201ENST00000605604 902 ntBASIC4.26□□□□□ -1.73
CDH13P55290 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CDH13P55290 RNU6-156P-201ENST00000621869 107 ntBASIC4.26□□□□□ -1.73
CDH13P55290 AC019278.1-201ENST00000623516 479 ntBASIC4.26□□□□□ -1.73
CDH13P55290 MFSD8-245ENST00000641743 948 ntBASIC4.26□□□□□ -1.73
CDH13P55290 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CDH13P55290 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH13P55290 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH13P55290 AC011978.2-201ENST00000569835 2054 ntBASIC4.26□□□□□ -1.73
CDH13P55290 MTND4P26-201ENST00000415971 1359 ntBASIC4.26□□□□□ -1.73
CDH13P55290 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDH13P55290 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH13P55290 SAGE4P-201ENST00000442271 3381 ntBASIC4.25□□□□□ -1.73
CDH13P55290 AC000367.1-201ENST00000452711 1766 ntBASIC4.25□□□□□ -1.73
CDH13P55290 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CDH13P55290 AC068254.2-201ENST00000623938 3577 ntBASIC4.25□□□□□ -1.73
CDH13P55290 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH13P55290 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CDH13P55290 RHOT1P2-201ENST00000366423 333 ntBASIC4.25□□□□□ -1.73
CDH13P55290 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH13P55290 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDH13P55290 AC097374.1-203ENST00000400783 485 ntBASIC4.25□□□□□ -1.73
CDH13P55290 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.25□□□□□ -1.73
CDH13P55290 RPS23P10-201ENST00000416185 486 ntBASIC4.25□□□□□ -1.73
CDH13P55290 AL449283.1-202ENST00000418249 604 ntBASIC4.25□□□□□ -1.73
CDH13P55290 AC008280.1-201ENST00000418851 412 ntBASIC4.25□□□□□ -1.73
CDH13P55290 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.25□□□□□ -1.73
CDH13P55290 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDH13P55290 RPF2P1-201ENST00000424137 906 ntBASIC4.25□□□□□ -1.73
CDH13P55290 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH13P55290 LYPLA1P1-201ENST00000434514 622 ntBASIC4.25□□□□□ -1.73
CDH13P55290 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.25□□□□□ -1.73
CDH13P55290 RPS26P56-201ENST00000444468 240 ntBASIC4.25□□□□□ -1.73
CDH13P55290 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CDH13P55290 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH13P55290 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH13P55290 HMGN3P1-201ENST00000453847 193 ntBASIC4.25□□□□□ -1.73
CDH13P55290 RPS15AP1-201ENST00000457423 391 ntBASIC4.25□□□□□ -1.73
CDH13P55290 RPS20P21-201ENST00000466859 343 ntBASIC4.25□□□□□ -1.73
CDH13P55290 AC018635.1-201ENST00000468292 1030 ntBASIC4.25□□□□□ -1.73
CDH13P55290 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.25□□□□□ -1.73
CDH13P55290 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.25□□□□□ -1.73
CDH13P55290 RNU6-415P-201ENST00000516252 97 ntBASIC4.25□□□□□ -1.73
CDH13P55290 AP001207.1-201ENST00000524051 481 ntBASIC4.25□□□□□ -1.73
CDH13P55290 OR7E13P-201ENST00000526052 910 ntBASIC4.25□□□□□ -1.73
CDH13P55290 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDH13P55290 OR4C2P-201ENST00000530855 1064 ntBASIC4.25□□□□□ -1.73
CDH13P55290 OR8K4P-201ENST00000534608 872 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms