Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 BMS1P21-201ENST00000634565 365 ntBASIC4.11□□□□□ -1.75
CDH11P55287 AC090897.3-201ENST00000636973 1157 ntBASIC4.11□□□□□ -1.75
CDH11P55287 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH11P55287 AC119744.1-201ENST00000454746 1715 ntBASIC4.11□□□□□ -1.75
CDH11P55287 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH11P55287 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH11P55287 AC000367.1-201ENST00000452711 1766 ntBASIC4.11□□□□□ -1.75
CDH11P55287 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.11□□□□□ -1.75
CDH11P55287 AC005261.4-201ENST00000600047 1385 ntBASIC4.11□□□□□ -1.75
CDH11P55287 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH11P55287 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
CDH11P55287 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.11□□□□□ -1.75
CDH11P55287 MFSD8-216ENST00000641147 4009 ntBASIC4.11□□□□□ -1.75
CDH11P55287 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDH11P55287 AC012020.1-201ENST00000624541 1728 ntBASIC4.1□□□□□ -1.75
CDH11P55287 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
CDH11P55287 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CDH11P55287 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.1□□□□□ -1.75
CDH11P55287 MIR16-1-201ENST00000385271 89 ntBASIC4.1□□□□□ -1.75
CDH11P55287 MIR92A2-201ENST00000385299 75 ntBASIC4.1□□□□□ -1.75
CDH11P55287 SNORA40.2-201ENST00000390847 128 ntBASIC4.1□□□□□ -1.75
CDH11P55287 Z98745.1-201ENST00000402553 494 ntBASIC4.1□□□□□ -1.75
CDH11P55287 AL078604.1-201ENST00000404609 466 ntBASIC4.1□□□□□ -1.75
CDH11P55287 VN1R8P-201ENST00000407739 893 ntBASIC4.1□□□□□ -1.75
CDH11P55287 RN7SKP267-201ENST00000410381 285 ntBASIC4.1□□□□□ -1.75
CDH11P55287 RAB28P1-201ENST00000411517 641 ntBASIC4.1□□□□□ -1.75
CDH11P55287 GSTM3P2-201ENST00000412746 530 ntBASIC4.1□□□□□ -1.75
CDH11P55287 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.1□□□□□ -1.75
CDH11P55287 OR4K6P-201ENST00000416478 897 ntBASIC4.1□□□□□ -1.75
CDH11P55287 Z75741.2-201ENST00000417272 1167 ntBASIC4.1□□□□□ -1.75
CDH11P55287 UBTFL3-201ENST00000418934 1024 ntBASIC4.1□□□□□ -1.75
CDH11P55287 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH11P55287 MOB1AP1-201ENST00000430903 535 ntBASIC4.1□□□□□ -1.75
CDH11P55287 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH11P55287 UBE2V1P5-201ENST00000440070 405 ntBASIC4.1□□□□□ -1.75
CDH11P55287 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH11P55287 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH11P55287 TPMTP4-201ENST00000450749 678 ntBASIC4.1□□□□□ -1.75
CDH11P55287 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDH11P55287 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDH11P55287 snoU13.1-201ENST00000459157 104 ntBASIC4.1□□□□□ -1.75
CDH11P55287 UBTFL6-201ENST00000477929 1024 ntBASIC4.1□□□□□ -1.75
CDH11P55287 AC015724.1-201ENST00000478577 156 ntBASIC4.1□□□□□ -1.75
CDH11P55287 RN7SL809P-201ENST00000482040 297 ntBASIC4.1□□□□□ -1.75
CDH11P55287 AC011037.1-201ENST00000483964 558 ntBASIC4.1□□□□□ -1.75
CDH11P55287 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.1□□□□□ -1.75
CDH11P55287 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.1□□□□□ -1.75
CDH11P55287 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH11P55287 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH11P55287 AK3P4-201ENST00000504283 583 ntBASIC4.1□□□□□ -1.75
CDH11P55287 VWA8P1-201ENST00000510889 176 ntBASIC4.1□□□□□ -1.75
CDH11P55287 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH11P55287 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.1□□□□□ -1.75
CDH11P55287 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH11P55287 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH11P55287 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.1□□□□□ -1.75
CDH11P55287 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.1□□□□□ -1.75
CDH11P55287 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH11P55287 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.1□□□□□ -1.75
CDH11P55287 AC090312.2-201ENST00000582687 378 ntBASIC4.1□□□□□ -1.75
CDH11P55287 GAS5-AS1-201ENST00000602767 694 ntBASIC4.1□□□□□ -1.75
CDH11P55287 PSMA6P4-201ENST00000603247 718 ntBASIC4.1□□□□□ -1.75
CDH11P55287 AC113368.1-201ENST00000603736 382 ntBASIC4.1□□□□□ -1.75
CDH11P55287 AC010201.1-201ENST00000605051 540 ntBASIC4.1□□□□□ -1.75
CDH11P55287 AC016877.3-201ENST00000606778 504 ntBASIC4.1□□□□□ -1.75
CDH11P55287 AL592148.2-201ENST00000612210 372 ntBASIC4.1□□□□□ -1.75
CDH11P55287 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDH11P55287 AC097655.1-201ENST00000635075 318 ntBASIC4.1□□□□□ -1.75
CDH11P55287 MFSD8-245ENST00000641743 948 ntBASIC4.1□□□□□ -1.75
CDH11P55287 OR6C71P-202ENST00000641886 1107 ntBASIC4.1□□□□□ -1.75
CDH11P55287 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDH11P55287 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.1□□□□□ -1.75
CDH11P55287 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CDH11P55287 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH11P55287 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH11P55287 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDH11P55287 AC046144.1-201ENST00000478559 1853 ntBASIC4.09□□□□□ -1.75
CDH11P55287 NXPH1-205ENST00000602349 1953 ntBASIC4.09□□□□□ -1.75
CDH11P55287 AL445437.1-201ENST00000623157 3087 ntBASIC4.09□□□□□ -1.75
CDH11P55287 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH11P55287 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
CDH11P55287 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDH11P55287 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH11P55287 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CDH11P55287 AL512646.1-201ENST00000269395 1077 ntBASIC4.09□□□□□ -1.75
CDH11P55287 OR4K15-201ENST00000305051 1216 ntBASIC4.09□□□□□ -1.75
CDH11P55287 RNU6-707P-201ENST00000364647 95 ntBASIC4.09□□□□□ -1.75
CDH11P55287 SNORA71.2-201ENST00000364941 134 ntBASIC4.09□□□□□ -1.75
CDH11P55287 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH11P55287 EIF4A1P3-201ENST00000411521 244 ntBASIC4.09□□□□□ -1.75
CDH11P55287 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH11P55287 TRGV6-201ENST00000417928 299 ntBASIC4.09□□□□□ -1.75
CDH11P55287 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.09□□□□□ -1.75
CDH11P55287 MTCO2P21-201ENST00000419780 677 ntBASIC4.09□□□□□ -1.75
CDH11P55287 AC062016.2-201ENST00000420950 676 ntBASIC4.09□□□□□ -1.75
CDH11P55287 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.09□□□□□ -1.75
CDH11P55287 RPF2P1-201ENST00000424137 906 ntBASIC4.09□□□□□ -1.75
CDH11P55287 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.09□□□□□ -1.75
CDH11P55287 AC073335.1-201ENST00000427776 363 ntBASIC4.09□□□□□ -1.75
CDH11P55287 C4BPAP2-201ENST00000428434 478 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms