Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 TAF9P1-201ENST00000445421 515 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 KATNBL1P6-201ENST00000453433 915 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 TAF9P2-201ENST00000454958 515 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AL024509.2-201ENST00000493462 493 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 RPS17P5-201ENST00000498293 408 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AC006499.2-201ENST00000513470 337 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 MTCYBP43-201ENST00000513621 740 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 SCARNA16.4-201ENST00000516956 187 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AC063949.1-201ENST00000552900 865 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AC127381.1-201ENST00000555979 939 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 KPNA2P3-201ENST00000584190 848 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AC006116.3-201ENST00000592968 361 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AC069307.1-201ENST00000602820 447 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AC109583.2-201ENST00000617367 129 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AC090510.2-201ENST00000617465 629 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AP002799.1-201ENST00000623552 423 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AC090971.4-201ENST00000560291 1800 ntBASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA3Q9Y5H0 AC011493.1-201ENST00000596753 1632 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 AL450326.2-201ENST00000421913 1962 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 RNU6-374P-201ENST00000364146 108 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 RNU6-657P-201ENST00000383904 107 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 RNU6-1293P-201ENST00000384077 107 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 RNU1-106P-201ENST00000384382 164 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 MIR585-201ENST00000384887 94 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 SSXP10-201ENST00000402595 565 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 AL138880.1-201ENST00000405824 642 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 U3.36-201ENST00000408418 213 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 RNA5SP487-201ENST00000410186 122 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 CTSL3P-202ENST00000412179 788 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 NUP35P2-201ENST00000416748 943 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 AL049610.1-201ENST00000423374 372 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 ZYG11AP1-201ENST00000430329 837 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 RPL12P17-201ENST00000432393 498 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 TMEM183AP1-205ENST00000432739 290 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 AL831737.1-201ENST00000441288 271 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 ARPC3P5-201ENST00000448802 534 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 RPS18P6-201ENST00000476880 458 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 AC010424.1-201ENST00000506336 297 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 NDUFB5P1-201ENST00000508134 564 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 MTND6P2-201ENST00000512226 524 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 MTND4LP31-201ENST00000514859 294 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 RPL12P22-201ENST00000519073 490 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 MIR3691-201ENST00000578066 90 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 AP001004.1-201ENST00000582468 324 ntBASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDHGA3Q9Y5H0 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms