Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 RPL7P34-201ENST00000433316 712 ntBASIC4.54□□□□□ -1.68
SIX4Q9UIU6 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 RPS27AP13-201ENST00000498403 237 ntBASIC4.54□□□□□ -1.68
SIX4Q9UIU6 BNIP3P41-201ENST00000503774 571 ntBASIC4.54□□□□□ -1.68
SIX4Q9UIU6 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 MRPL49P2-201ENST00000521066 465 ntBASIC4.54□□□□□ -1.68
SIX4Q9UIU6 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 AC233702.9-201ENST00000581528 203 ntBASIC4.54□□□□□ -1.68
SIX4Q9UIU6 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 AC107952.2-201ENST00000606048 486 ntBASIC4.54□□□□□ -1.68
SIX4Q9UIU6 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 AC013468.1-201ENST00000608680 598 ntBASIC4.54□□□□□ -1.68
SIX4Q9UIU6 AC097478.2-201ENST00000610572 514 ntBASIC4.54□□□□□ -1.68
SIX4Q9UIU6 AL121895.2-201ENST00000619558 447 ntBASIC4.54□□□□□ -1.68
SIX4Q9UIU6 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.54□□□□□ -1.68
SIX4Q9UIU6 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 AC139713.2-215ENST00000641428 5037 ntBASIC4.54□□□□□ -1.68
SIX4Q9UIU6 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 AC006971.1-201ENST00000407916 4486 ntBASIC4.54□□□□□ -1.68
SIX4Q9UIU6 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 AC092435.4-201ENST00000623012 4159 ntBASIC4.54□□□□□ -1.68
SIX4Q9UIU6 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
SIX4Q9UIU6 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 AL121657.1-201ENST00000327215 531 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 IL6STP1-201ENST00000346911 1020 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 RNU1-15P-201ENST00000353977 144 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 RNU4-68P-201ENST00000364314 141 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 RNU4-28P-201ENST00000364739 141 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 RNU4-31P-201ENST00000384211 141 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 DNAJC19P6-201ENST00000401853 280 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 HDGFP1-201ENST00000405943 252 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 AL136131.1-201ENST00000406079 803 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 RN7SKP182-201ENST00000410772 298 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 AC013404.1-201ENST00000413068 249 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 AL161631.1-201ENST00000417933 486 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 RPS3AP37-201ENST00000419176 745 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 RPL23AP38-201ENST00000423801 469 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 C1DP1-201ENST00000426049 402 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 COX6CP15-201ENST00000426313 211 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 CACYBPP1-201ENST00000438592 684 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 MTND6P18-201ENST00000439477 513 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 RPL34P26-201ENST00000445636 354 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 AC092685.1-201ENST00000447960 1243 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 AL035407.2-201ENST00000454090 378 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 RPS6P2-201ENST00000454208 705 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 AC021205.1-201ENST00000468797 348 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 RPS29P19-201ENST00000479709 171 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 AC079203.1-201ENST00000487972 404 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 AC023050.1-201ENST00000498198 304 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 AC005351.1-201ENST00000511152 786 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 MRPS36P3-201ENST00000519284 130 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 AC105233.3-201ENST00000531125 744 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.53□□□□□ -1.68
SIX4Q9UIU6 PARP1P2-201ENST00000556806 195 ntBASIC4.53□□□□□ -1.68
SIX4Q9UIU6 AC004223.2-201ENST00000590309 544 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms