Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 DNAJC19P7-201ENST00000428811 344 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 HSPD1P12-201ENST00000429127 1069 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 HMGB1P31-201ENST00000437242 427 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AC112653.1-201ENST00000443851 386 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AC114755.5-201ENST00000447760 831 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AC090804.1-201ENST00000448870 490 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AC073264.2-201ENST00000448886 166 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 RPL7P48-201ENST00000461513 746 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 KLF3P2-201ENST00000465138 268 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AC092989.1-201ENST00000481235 277 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AC109635.3-201ENST00000529536 185 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AC124947.2-202ENST00000552735 133 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AC009027.1-201ENST00000604510 479 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AP000860.1-201ENST00000605250 559 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AP001330.5-201ENST00000607176 411 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AC098614.4-201ENST00000607601 462 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AC091304.9-201ENST00000612091 226 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AC239868.2-201ENST00000564237 4527 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 CCT8P1-201ENST00000413611 1657 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 AC092747.4-201ENST00000620519 1861 ntBASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 AC079741.1-201ENST00000321498 212 ntBASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 MIR217-201ENST00000384817 110 ntBASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 HSPA8P15-201ENST00000401676 786 ntBASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 RPS16P5-201ENST00000406501 404 ntBASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 MTCO1P17-201ENST00000411522 491 ntBASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 AC119751.6-201ENST00000416712 186 ntBASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 AC093698.1-201ENST00000423843 571 ntBASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 Z93242.1-201ENST00000427102 353 ntBASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 AC098824.1-201ENST00000453565 980 ntBASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 AC108941.1-201ENST00000502853 530 ntBASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 AP006289.1-201ENST00000538089 277 ntBASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 SULT1C2P2-201ENST00000562517 294 ntBASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 EIF5A2P1-201ENST00000564027 460 ntBASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 ATP5J2P6-201ENST00000565203 266 ntBASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 AC020914.6-201ENST00000594327 272 ntBASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 AC008814.1-201ENST00000603797 406 ntBASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 MIR6780A-201ENST00000615089 68 ntBASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 AC018816.2-201ENST00000621460 353 ntBASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 AC027228.2-201ENST00000567141 2154 ntBASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDLIM7Q9NR12 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PDLIM7Q9NR12 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
PDLIM7Q9NR12 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PDLIM7Q9NR12 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PDLIM7Q9NR12 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AL137141.1-201ENST00000624622 4836 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms