Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 MIR6875-201ENST00000617506 72 ntBASIC3.59□□□□□ -1.83
LRTM1Q9HBL6 AP003400.2-201ENST00000624036 666 ntBASIC3.59□□□□□ -1.83
LRTM1Q9HBL6 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LRTM1Q9HBL6 CDRT1-208ENST00000630868 794 ntBASIC3.59□□□□□ -1.83
LRTM1Q9HBL6 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.59□□□□□ -1.83
LRTM1Q9HBL6 AC009452.1-201ENST00000640823 606 ntBASIC3.59□□□□□ -1.83
LRTM1Q9HBL6 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.59□□□□□ -1.83
LRTM1Q9HBL6 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
LRTM1Q9HBL6 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 MIR449B-201ENST00000384995 97 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 HMGB3P20-201ENST00000417997 600 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 AC114814.2-201ENST00000419195 485 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 AL691447.1-201ENST00000419456 387 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 FTH1P6-201ENST00000430768 320 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 AL365396.1-201ENST00000430854 671 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 NDUFB1P1-201ENST00000435191 180 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 SETD6P1-201ENST00000444575 317 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 AC099563.1-201ENST00000456086 418 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 OR9M1P-201ENST00000459641 921 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 AC105918.1-201ENST00000474399 838 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 MTND6P6-201ENST00000478031 263 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 AP000926.1-201ENST00000479573 241 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 VN1R105P-201ENST00000486595 910 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 AC010460.1-201ENST00000507087 466 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 AL121766.1-201ENST00000547436 487 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 CBX3P5-201ENST00000552017 521 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 VN1R79P-201ENST00000593540 513 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 AC005255.1-201ENST00000593748 216 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 AL606490.9-201ENST00000603331 271 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 AC006946.3-201ENST00000609791 756 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 AP001486.2-201ENST00000561652 5113 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 MAPK10-372ENST00000641954 3413 ntBASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRTM1Q9HBL6 AC106871.1-201ENST00000568324 3102 ntBASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 SNORA71.3-201ENST00000362582 128 ntBASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 RNU6-283P-201ENST00000364788 107 ntBASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 SNORA3.3-201ENST00000408712 125 ntBASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 OR8F1P-201ENST00000425243 930 ntBASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 GOT2P5-201ENST00000433995 546 ntBASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 AC092013.1-201ENST00000438795 332 ntBASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 RRM2P4-201ENST00000441721 562 ntBASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 RPL7P31-201ENST00000450192 724 ntBASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 AC037198.2-201ENST00000478845 733 ntBASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 AC106872.2-201ENST00000494303 480 ntBASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 AL161756.2-201ENST00000604597 246 ntBASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 CR392039.5-201ENST00000623201 510 ntBASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 AC020978.9-201ENST00000624380 1141 ntBASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.57□□□□□ -1.84
LRTM1Q9HBL6 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms