Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC005776.1-201ENST00000603164 290 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 AC020910.2-201ENST00000603635 610 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 AL139395.1-201ENST00000603662 160 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 HSPE1P14-201ENST00000605812 302 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.38□□□□□ -1.71
VMP1Q96GC9 MIR4278-201ENST00000636094 69 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 AL590396.4-201ENST00000636779 956 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
VMP1Q96GC9 AC006971.1-201ENST00000407916 4486 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VMP1Q96GC9 OTUD4P1-201ENST00000237841 3067 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.38□□□□□ -1.71
VMP1Q96GC9 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VMP1Q96GC9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VMP1Q96GC9 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.38□□□□□ -1.71
VMP1Q96GC9 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VMP1Q96GC9 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.37□□□□□ -1.71
VMP1Q96GC9 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VMP1Q96GC9 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
VMP1Q96GC9 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.37□□□□□ -1.71
VMP1Q96GC9 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
VMP1Q96GC9 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.37□□□□□ -1.71
VMP1Q96GC9 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VMP1Q96GC9 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.37□□□□□ -1.71
VMP1Q96GC9 SNORA31-201ENST00000362607 130 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 RNA5SP189-201ENST00000364920 115 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 SNORA71.2-201ENST00000364941 134 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VMP1Q96GC9 RNU6-441P-201ENST00000384545 106 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
VMP1Q96GC9 AC245028.1-201ENST00000423259 256 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.37□□□□□ -1.71
VMP1Q96GC9 AC017083.1-201ENST00000428093 483 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.37□□□□□ -1.71
VMP1Q96GC9 AL353748.1-201ENST00000440753 474 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.37□□□□□ -1.71
VMP1Q96GC9 AL162151.2-201ENST00000448875 158 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 CDC42P1-201ENST00000456658 548 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 PRDX3P4-201ENST00000470828 747 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 AC008897.1-201ENST00000494006 347 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
VMP1Q96GC9 USP9YP5-201ENST00000511770 630 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.37□□□□□ -1.71
VMP1Q96GC9 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.37□□□□□ -1.71
VMP1Q96GC9 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.37□□□□□ -1.71
VMP1Q96GC9 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VMP1Q96GC9 AC113192.3-201ENST00000529152 742 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.37□□□□□ -1.71
VMP1Q96GC9 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
VMP1Q96GC9 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.37□□□□□ -1.71
VMP1Q96GC9 FKBP1BP1-201ENST00000553366 325 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 AL136520.1-202ENST00000555494 763 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.37□□□□□ -1.71
VMP1Q96GC9 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.37□□□□□ -1.71
VMP1Q96GC9 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.37□□□□□ -1.71
VMP1Q96GC9 MIR4330-201ENST00000579077 105 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.37□□□□□ -1.71
VMP1Q96GC9 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.37□□□□□ -1.71
VMP1Q96GC9 RPL7P50-201ENST00000600588 727 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 AC068790.7-201ENST00000602347 528 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 AC008638.3-201ENST00000603341 463 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 AP002906.1-201ENST00000603405 233 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 IGHV3-29-201ENST00000604817 344 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 AC110741.2-201ENST00000605278 268 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 AC103710.3-201ENST00000608157 948 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 AL136295.6-201ENST00000610486 658 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 RN7SL722P-201ENST00000617780 284 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 RN7SL565P-201ENST00000618246 284 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 GABPAP-201ENST00000419271 1356 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
VMP1Q96GC9 DHX40P1-201ENST00000588725 1412 ntBASIC4.37□□□□□ -1.71
VMP1Q96GC9 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VMP1Q96GC9 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
VMP1Q96GC9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.36□□□□□ -1.71
VMP1Q96GC9 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.36□□□□□ -1.71
VMP1Q96GC9 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
VMP1Q96GC9 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VMP1Q96GC9 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
VMP1Q96GC9 LINC02471-203ENST00000641941 4752 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 RN7SKP115-201ENST00000363177 317 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 Y_RNA.110-201ENST00000363220 99 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.36□□□□□ -1.71
VMP1Q96GC9 RNU6-1226P-201ENST00000384317 107 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 OR51A3P-201ENST00000413596 924 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 EI24P1-201ENST00000416584 867 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 AC004552.1-201ENST00000419089 348 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.36□□□□□ -1.71
VMP1Q96GC9 COX6CP15-201ENST00000426313 211 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 AC068287.1-201ENST00000430283 295 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 AL158053.1-201ENST00000441503 453 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.36□□□□□ -1.71
VMP1Q96GC9 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.36□□□□□ -1.71
VMP1Q96GC9 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.36□□□□□ -1.71
VMP1Q96GC9 AC010307.1-201ENST00000467206 836 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 RPS26P3-201ENST00000470205 348 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 RPL12P20-201ENST00000475538 479 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 AC090543.2-201ENST00000483963 348 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 AC004057.1-201ENST00000485827 348 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.36□□□□□ -1.71
VMP1Q96GC9 RPL23AP72-201ENST00000492447 435 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms