Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF43Q68DV7 RNU6-196P-201ENST00000384315 107 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 Y_RNA.481-201ENST00000384373 102 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 PEX12P1-201ENST00000400284 1048 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 MYL6P5-201ENST00000412707 459 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 AL353193.1-201ENST00000421444 268 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 AC140479.2-201ENST00000421567 3130 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF43Q68DV7 MTCO2P5-201ENST00000422621 426 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 RIMKLBP2-201ENST00000424737 654 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.12□□□□□ -1.43
RNF43Q68DV7 AC005033.1-201ENST00000428904 813 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 DYNLL1P7-201ENST00000429273 258 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 SKP1P3-201ENST00000429280 487 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
RNF43Q68DV7 RPS27P18-201ENST00000431701 247 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.12□□□□□ -1.43
RNF43Q68DV7 AC104164.1-201ENST00000460282 590 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 RPS17P15-201ENST00000475609 349 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 RN7SL799P-201ENST00000475891 298 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF43Q68DV7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF43Q68DV7 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC6.12□□□□□ -1.43
RNF43Q68DV7 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.12□□□□□ -1.43
RNF43Q68DV7 RNA5SP34-201ENST00000516887 130 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 CYCSP22-201ENST00000517555 339 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 OR5BR1P-201ENST00000524992 1330 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 PCNAP4-201ENST00000532690 730 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF43Q68DV7 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF43Q68DV7 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF43Q68DV7 PDCD5P1-201ENST00000543528 309 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC6.12□□□□□ -1.43
RNF43Q68DV7 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
RNF43Q68DV7 DNAJC8P1-201ENST00000554535 372 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 RPL21P5-201ENST00000554662 472 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
RNF43Q68DV7 AC044860.2-201ENST00000561005 179 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 AC011840.5-201ENST00000582125 771 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.12□□□□□ -1.43
RNF43Q68DV7 AC060780.2-201ENST00000589047 198 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 AC007621.1-201ENST00000604544 437 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF43Q68DV7 PISRT1-201ENST00000626175 531 ntBASIC6.12□□□□□ -1.43
RNF43Q68DV7 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
RNF43Q68DV7 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
RNF43Q68DV7 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF43Q68DV7 AC021242.1-201ENST00000507315 2035 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.11□□□□□ -1.43
RNF43Q68DV7 AL118496.1-201ENST00000440201 1812 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 AC114774.1-201ENST00000507410 1770 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
RNF43Q68DV7 AC108467.2-201ENST00000617640 1597 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF43Q68DV7 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF43Q68DV7 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.11□□□□□ -1.43
RNF43Q68DV7 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RNF43Q68DV7 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
RNF43Q68DV7 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RNF43Q68DV7 OR10R3P-201ENST00000361688 942 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 AL672167.2-201ENST00000377164 879 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 Y_RNA.401-201ENST00000383965 117 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 RNU6-533P-201ENST00000384144 107 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 RN7SKP32-201ENST00000410167 303 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC6.11□□□□□ -1.43
RNF43Q68DV7 BX323845.3-201ENST00000428215 527 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF43Q68DV7 NPM1P18-201ENST00000434232 732 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 AC236972.2-201ENST00000434979 310 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 RPL7P54-201ENST00000438336 674 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC6.11□□□□□ -1.43
RNF43Q68DV7 RPL7P12-201ENST00000446719 750 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF43Q68DV7 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC6.11□□□□□ -1.43
RNF43Q68DV7 KCTD9P2-201ENST00000512203 1013 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.11□□□□□ -1.43
RNF43Q68DV7 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF43Q68DV7 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC6.11□□□□□ -1.43
RNF43Q68DV7 AC025260.1-201ENST00000548858 430 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.11□□□□□ -1.43
RNF43Q68DV7 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC6.11□□□□□ -1.43
RNF43Q68DV7 AC110588.1-201ENST00000559699 137 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 AL845331.3-202ENST00000562856 261 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 AC010547.6-201ENST00000571789 193 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 AC100830.2-201ENST00000581636 240 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.11□□□□□ -1.43
RNF43Q68DV7 7SK.7-201ENST00000603504 247 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.11□□□□□ -1.43
RNF43Q68DV7 uc_338.5-201ENST00000611839 155 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 AC005332.6-201ENST00000613178 446 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 AC068722.2-201ENST00000618734 544 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.11□□□□□ -1.43
RNF43Q68DV7 AC009268.2-201ENST00000621925 457 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 AC018445.2-201ENST00000622987 260 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.11□□□□□ -1.43
RNF43Q68DV7 AC005224.3-201ENST00000584683 2140 ntBASIC6.11□□□□□ -1.43
RNF43Q68DV7 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF43Q68DV7 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF43Q68DV7 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF43Q68DV7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms