Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 IPO8P1-201ENST00000455509 3109 ntBASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 OR5H2-201ENST00000355273 945 ntBASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 DMD-228ENST00000541735 7080 ntTSL 5 BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 MIR448-201ENST00000362131 111 ntBASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 RN7SKP199-201ENST00000410325 305 ntBASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 MTND2P11-201ENST00000423638 648 ntBASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 AC023598.1-201ENST00000472521 361 ntBASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 AC017037.1-201ENST00000508460 471 ntBASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 UBTFL9-201ENST00000534504 1148 ntBASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 AP000255.1-201ENST00000610276 676 ntBASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
VPS13DQ5THJ4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 AC009963.1-201ENST00000417265 157 ntBASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 RPF2P1-201ENST00000424137 906 ntBASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 BX890604.2-201ENST00000427883 474 ntBASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 EIF4A1P11-201ENST00000451239 222 ntBASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 AC138627.1-204ENST00000641894 765 ntBASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 DLD-204ENST00000437604 1859 ntTSL 2 BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 AC007496.3-201ENST00000624987 3443 ntBASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 NPM1P48-201ENST00000436002 853 ntBASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 RPL7P48-201ENST00000461513 746 ntBASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 EIF5A2P1-201ENST00000564027 460 ntBASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 AC105227.2-201ENST00000615075 605 ntBASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 AL713922.2-201ENST00000619384 716 ntBASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 CEP170P1-201ENST00000502249 4587 ntBASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS13DQ5THJ4 AL353692.2-201ENST00000407054 335 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 LIPT1P1-201ENST00000415870 1186 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 OR6K4P-201ENST00000423179 955 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 HLA-N-201ENST00000437516 135 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 SKP1P1-201ENST00000438081 489 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 AC084357.1-201ENST00000473404 255 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 AC021205.2-201ENST00000480069 347 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 AL512310.1-201ENST00000548639 172 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 BDH2P1-201ENST00000602288 736 ntBASIC2.28□□□□□ -2.04
VPS13DQ5THJ4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms