Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 PDCL2P2-201ENST00000533651 189 ntBASIC3.87□□□□□ -1.79
CX3CL1P78423 DUXAP6-201ENST00000553858 601 ntBASIC3.87□□□□□ -1.79
CX3CL1P78423 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.87□□□□□ -1.79
CX3CL1P78423 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.87□□□□□ -1.79
CX3CL1P78423 AC087465.1-201ENST00000560574 245 ntBASIC3.87□□□□□ -1.79
CX3CL1P78423 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.87□□□□□ -1.79
CX3CL1P78423 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.87□□□□□ -1.79
CX3CL1P78423 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.87□□□□□ -1.79
CX3CL1P78423 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.87□□□□□ -1.79
CX3CL1P78423 AC067852.4-201ENST00000590314 478 ntBASIC3.87□□□□□ -1.79
CX3CL1P78423 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.87□□□□□ -1.79
CX3CL1P78423 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.87□□□□□ -1.79
CX3CL1P78423 NIFKP6-201ENST00000598115 845 ntBASIC3.87□□□□□ -1.79
CX3CL1P78423 AC133552.5-201ENST00000604266 540 ntBASIC3.87□□□□□ -1.79
CX3CL1P78423 AC091946.2-201ENST00000606105 291 ntBASIC3.87□□□□□ -1.79
CX3CL1P78423 AC010424.2-201ENST00000607594 443 ntBASIC3.87□□□□□ -1.79
CX3CL1P78423 AC005332.6-201ENST00000613178 446 ntBASIC3.87□□□□□ -1.79
CX3CL1P78423 MIR7155-201ENST00000615925 56 ntBASIC3.87□□□□□ -1.79
CX3CL1P78423 AC121761.2-201ENST00000617300 689 ntBASIC3.87□□□□□ -1.79
CX3CL1P78423 AC069209.1-201ENST00000619282 651 ntBASIC3.87□□□□□ -1.79
CX3CL1P78423 MIR6719-201ENST00000622428 87 ntBASIC3.87□□□□□ -1.79
CX3CL1P78423 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
CX3CL1P78423 AC116618.1-201ENST00000634617 774 ntBASIC3.87□□□□□ -1.79
CX3CL1P78423 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
CX3CL1P78423 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.87□□□□□ -1.79
CX3CL1P78423 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CX3CL1P78423 AC107982.1-201ENST00000507171 1300 ntBASIC3.87□□□□□ -1.79
CX3CL1P78423 DDX18P5-201ENST00000534547 1306 ntBASIC3.87□□□□□ -1.79
CX3CL1P78423 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC3.87□□□□□ -1.79
CX3CL1P78423 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CX3CL1P78423 INTS6P1-201ENST00000504674 2530 ntBASIC3.87□□□□□ -1.79
CX3CL1P78423 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CX3CL1P78423 AP000776.1-201ENST00000530032 1663 ntBASIC3.87□□□□□ -1.79
CX3CL1P78423 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CX3CL1P78423 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CX3CL1P78423 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CX3CL1P78423 AC117529.2-201ENST00000512159 2068 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 ERCC6-202ENST00000374127 1782 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CX3CL1P78423 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CX3CL1P78423 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CX3CL1P78423 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CX3CL1P78423 MTND5P28-201ENST00000438005 1594 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CX3CL1P78423 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CX3CL1P78423 RN7SKP104-201ENST00000362605 328 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 RNU1-85P-201ENST00000364127 164 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 TAF9BP1-201ENST00000396646 746 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 AL589647.1-201ENST00000402485 466 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 RNA5SP345-201ENST00000410646 108 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 MTND4P22-201ENST00000413116 1169 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.86□□□□□ -1.79
CX3CL1P78423 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CX3CL1P78423 FABP7P1-201ENST00000424004 391 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.86□□□□□ -1.79
CX3CL1P78423 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.86□□□□□ -1.79
CX3CL1P78423 MTND1P32-201ENST00000433043 938 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 MTCYBP31-201ENST00000438855 1122 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 PTMAP6-201ENST00000439110 327 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.86□□□□□ -1.79
CX3CL1P78423 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.86□□□□□ -1.79
CX3CL1P78423 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.86□□□□□ -1.79
CX3CL1P78423 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.86□□□□□ -1.79
CX3CL1P78423 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.86□□□□□ -1.79
CX3CL1P78423 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.86□□□□□ -1.79
CX3CL1P78423 AC005008.1-201ENST00000456151 612 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 RPL23AP56-201ENST00000460778 453 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.86□□□□□ -1.79
CX3CL1P78423 ACTG1P13-201ENST00000486987 1043 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 HMGB1P21-201ENST00000502313 581 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.86□□□□□ -1.79
CX3CL1P78423 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.86□□□□□ -1.79
CX3CL1P78423 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.86□□□□□ -1.79
CX3CL1P78423 AC109445.1-201ENST00000512356 383 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 AC110775.1-201ENST00000513721 462 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 MTCO1P30-201ENST00000515244 580 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.86□□□□□ -1.79
CX3CL1P78423 UBTFL10-201ENST00000528532 562 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC3.86□□□□□ -1.79
CX3CL1P78423 AC008033.2-201ENST00000542626 177 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.86□□□□□ -1.79
CX3CL1P78423 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.86□□□□□ -1.79
CX3CL1P78423 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.86□□□□□ -1.79
CX3CL1P78423 MIR4646-201ENST00000580775 63 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.86□□□□□ -1.79
CX3CL1P78423 AC020910.3-201ENST00000603701 874 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 AL021707.7-201ENST00000607991 416 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 AC012414.7-202ENST00000622705 1090 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 AC017037.3-201ENST00000625016 472 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 AC019226.2-201ENST00000625973 424 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 MIR1322-201ENST00000638013 71 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.86□□□□□ -1.79
CX3CL1P78423 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
CX3CL1P78423 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CX3CL1P78423 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.86□□□□□ -1.79
CX3CL1P78423 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.86□□□□□ -1.79
CX3CL1P78423 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CX3CL1P78423 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CX3CL1P78423 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC3.86□□□□□ -1.79
CX3CL1P78423 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms