Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AP000926.4-201ENST00000527351 454 ntBASIC3.69□□□□□ -1.82
LMO4P61968 MTND2P26-201ENST00000528255 1029 ntBASIC3.69□□□□□ -1.82
LMO4P61968 OR8I1P-201ENST00000529291 931 ntBASIC3.69□□□□□ -1.82
LMO4P61968 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.69□□□□□ -1.82
LMO4P61968 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.69□□□□□ -1.82
LMO4P61968 AC087897.1-201ENST00000550134 156 ntBASIC3.69□□□□□ -1.82
LMO4P61968 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.69□□□□□ -1.82
LMO4P61968 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.69□□□□□ -1.82
LMO4P61968 MIR4789-201ENST00000577469 82 ntBASIC3.69□□□□□ -1.82
LMO4P61968 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.69□□□□□ -1.82
LMO4P61968 AP001094.1-201ENST00000579805 193 ntBASIC3.69□□□□□ -1.82
LMO4P61968 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LMO4P61968 AC103792.1-201ENST00000603591 919 ntBASIC3.69□□□□□ -1.82
LMO4P61968 MTND3P19-201ENST00000603825 345 ntBASIC3.69□□□□□ -1.82
LMO4P61968 AC079587.1-201ENST00000603846 277 ntBASIC3.69□□□□□ -1.82
LMO4P61968 AC113403.1-201ENST00000604910 193 ntBASIC3.69□□□□□ -1.82
LMO4P61968 AL355816.1-201ENST00000607951 118 ntBASIC3.69□□□□□ -1.82
LMO4P61968 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.69□□□□□ -1.82
LMO4P61968 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.69□□□□□ -1.82
LMO4P61968 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.69□□□□□ -1.82
LMO4P61968 uc_338.13-201ENST00000618243 179 ntBASIC3.69□□□□□ -1.82
LMO4P61968 AC123767.1-202ENST00000620407 817 ntBASIC3.69□□□□□ -1.82
LMO4P61968 AL023881.1-201ENST00000621088 301 ntBASIC3.69□□□□□ -1.82
LMO4P61968 AC138965.3-201ENST00000623875 498 ntBASIC3.69□□□□□ -1.82
LMO4P61968 AC068724.3-201ENST00000625906 87 ntBASIC3.69□□□□□ -1.82
LMO4P61968 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC3.69□□□□□ -1.82
LMO4P61968 AL603750.1-201ENST00000624216 1717 ntBASIC3.69□□□□□ -1.82
LMO4P61968 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
LMO4P61968 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
LMO4P61968 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LMO4P61968 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
LMO4P61968 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
LMO4P61968 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC3.69□□□□□ -1.82
LMO4P61968 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.69□□□□□ -1.82
LMO4P61968 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.69□□□□□ -1.82
LMO4P61968 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.69□□□□□ -1.82
LMO4P61968 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
LMO4P61968 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.68□□□□□ -1.82
LMO4P61968 ANAPC1P1-201ENST00000426186 2145 ntBASIC3.68□□□□□ -1.82
LMO4P61968 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LMO4P61968 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LMO4P61968 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LMO4P61968 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
LMO4P61968 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
LMO4P61968 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LMO4P61968 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LMO4P61968 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
LMO4P61968 AC006042.3-201ENST00000454684 1469 ntBASIC3.68□□□□□ -1.82
LMO4P61968 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LMO4P61968 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
LMO4P61968 AC005261.4-201ENST00000600047 1385 ntBASIC3.68□□□□□ -1.82
LMO4P61968 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LMO4P61968 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
LMO4P61968 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.68□□□□□ -1.82
LMO4P61968 AC114546.3-201ENST00000623582 1734 ntBASIC3.68□□□□□ -1.82
LMO4P61968 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
LMO4P61968 MIR331-201ENST00000362302 94 ntBASIC3.68□□□□□ -1.82
LMO4P61968 RNU1-83P-201ENST00000363426 164 ntBASIC3.68□□□□□ -1.82
LMO4P61968 RNU1-132P-201ENST00000364300 164 ntBASIC3.68□□□□□ -1.82
LMO4P61968 RNA5SP479-201ENST00000364858 117 ntBASIC3.68□□□□□ -1.82
LMO4P61968 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LMO4P61968 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
LMO4P61968 AL136310.1-201ENST00000404926 654 ntBASIC3.68□□□□□ -1.82
LMO4P61968 FCF1P5-201ENST00000406490 482 ntBASIC3.68□□□□□ -1.82
LMO4P61968 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.68□□□□□ -1.82
LMO4P61968 RPL23AP26-201ENST00000412728 464 ntBASIC3.68□□□□□ -1.82
LMO4P61968 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.68□□□□□ -1.82
LMO4P61968 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.68□□□□□ -1.82
LMO4P61968 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.68□□□□□ -1.82
LMO4P61968 USP9YP26-201ENST00000421008 661 ntBASIC3.68□□□□□ -1.82
LMO4P61968 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LMO4P61968 AL390023.1-201ENST00000428836 262 ntBASIC3.68□□□□□ -1.82
LMO4P61968 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LMO4P61968 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.68□□□□□ -1.82
LMO4P61968 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.68□□□□□ -1.82
LMO4P61968 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.68□□□□□ -1.82
LMO4P61968 UBE2D3P1-201ENST00000436669 444 ntBASIC3.68□□□□□ -1.82
LMO4P61968 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.68□□□□□ -1.82
LMO4P61968 AL096803.2-201ENST00000450032 677 ntBASIC3.68□□□□□ -1.82
LMO4P61968 MTND1P27-201ENST00000451117 902 ntBASIC3.68□□□□□ -1.82
LMO4P61968 AC073387.1-201ENST00000453261 709 ntBASIC3.68□□□□□ -1.82
LMO4P61968 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LMO4P61968 AC005410.1-202ENST00000460347 485 ntBASIC3.68□□□□□ -1.82
LMO4P61968 APOOP2-201ENST00000461561 539 ntBASIC3.68□□□□□ -1.82
LMO4P61968 AC006511.1-201ENST00000470614 315 ntBASIC3.68□□□□□ -1.82
LMO4P61968 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LMO4P61968 AC105137.1-201ENST00000484355 562 ntBASIC3.68□□□□□ -1.82
LMO4P61968 AC041039.1-201ENST00000485656 536 ntBASIC3.68□□□□□ -1.82
LMO4P61968 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.68□□□□□ -1.82
LMO4P61968 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC3.68□□□□□ -1.82
LMO4P61968 MTCYBP16-201ENST00000509187 1129 ntBASIC3.68□□□□□ -1.82
LMO4P61968 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LMO4P61968 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.68□□□□□ -1.82
LMO4P61968 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.68□□□□□ -1.82
LMO4P61968 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.68□□□□□ -1.82
LMO4P61968 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.68□□□□□ -1.82
LMO4P61968 AP003717.3-201ENST00000544832 1180 ntBASIC3.68□□□□□ -1.82
LMO4P61968 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.68□□□□□ -1.82
LMO4P61968 LSM3P2-201ENST00000551246 273 ntBASIC3.68□□□□□ -1.82
LMO4P61968 AL109766.1-201ENST00000555080 552 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms