Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.41□□□□□ -1.7
LHX1P48742 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.41□□□□□ -1.7
LHX1P48742 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.41□□□□□ -1.7
LHX1P48742 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.41□□□□□ -1.7
LHX1P48742 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.41□□□□□ -1.7
LHX1P48742 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.41□□□□□ -1.7
LHX1P48742 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.41□□□□□ -1.7
LHX1P48742 EIF1P6-201ENST00000600054 334 ntBASIC4.41□□□□□ -1.7
LHX1P48742 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.41□□□□□ -1.7
LHX1P48742 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
LHX1P48742 AL158050.2-201ENST00000605336 568 ntBASIC4.41□□□□□ -1.7
LHX1P48742 AC010857.1-201ENST00000606398 594 ntBASIC4.41□□□□□ -1.7
LHX1P48742 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.41□□□□□ -1.7
LHX1P48742 AL391834.2-201ENST00000609982 546 ntBASIC4.41□□□□□ -1.7
LHX1P48742 MIR6867-201ENST00000610636 67 ntBASIC4.41□□□□□ -1.7
LHX1P48742 LINC00901.1-201ENST00000617252 152 ntBASIC4.41□□□□□ -1.7
LHX1P48742 AC023509.5-201ENST00000617434 807 ntBASIC4.41□□□□□ -1.7
LHX1P48742 AL512427.1-201ENST00000618593 349 ntBASIC4.41□□□□□ -1.7
LHX1P48742 AC009269.6-201ENST00000621778 588 ntBASIC4.41□□□□□ -1.7
LHX1P48742 AP005264.7-201ENST00000625003 745 ntBASIC4.41□□□□□ -1.7
LHX1P48742 AC073055.1-201ENST00000456901 1621 ntBASIC4.41□□□□□ -1.7
LHX1P48742 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
LHX1P48742 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
LHX1P48742 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LHX1P48742 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LHX1P48742 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.41□□□□□ -1.7
LHX1P48742 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LHX1P48742 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LHX1P48742 USP9YP4-201ENST00000424401 1745 ntBASIC4.41□□□□□ -1.7
LHX1P48742 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
LHX1P48742 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.4□□□□□ -1.7
LHX1P48742 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LHX1P48742 ERCC6-202ENST00000374127 1782 ntBASIC4.4□□□□□ -1.7
LHX1P48742 AL450326.2-201ENST00000421913 1962 ntBASIC4.4□□□□□ -1.7
LHX1P48742 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
LHX1P48742 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
LHX1P48742 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
LHX1P48742 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LHX1P48742 SPRR2C-201ENST00000290702 219 ntBASIC4.4□□□□□ -1.71
LHX1P48742 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LHX1P48742 SNORA60-201ENST00000362396 134 ntBASIC4.4□□□□□ -1.71
LHX1P48742 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
LHX1P48742 RNU6-925P-201ENST00000384629 104 ntBASIC4.4□□□□□ -1.71
LHX1P48742 RNU6-932P-201ENST00000391108 106 ntBASIC4.4□□□□□ -1.71
LHX1P48742 SNORA68.2-201ENST00000391263 128 ntBASIC4.4□□□□□ -1.71
LHX1P48742 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
LHX1P48742 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.4□□□□□ -1.71
LHX1P48742 OR8G2P-201ENST00000412796 908 ntBASIC4.4□□□□□ -1.71
LHX1P48742 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.4□□□□□ -1.71
LHX1P48742 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.4□□□□□ -1.71
LHX1P48742 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.4□□□□□ -1.71
LHX1P48742 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.4□□□□□ -1.71
LHX1P48742 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.4□□□□□ -1.71
LHX1P48742 AC000041.1-201ENST00000439655 175 ntBASIC4.4□□□□□ -1.71
LHX1P48742 HMGB3P9-201ENST00000441799 583 ntBASIC4.4□□□□□ -1.71
LHX1P48742 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.4□□□□□ -1.71
LHX1P48742 AC006011.1-201ENST00000442758 349 ntBASIC4.4□□□□□ -1.71
LHX1P48742 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.4□□□□□ -1.71
LHX1P48742 AC073587.1-201ENST00000447093 876 ntBASIC4.4□□□□□ -1.71
LHX1P48742 EIF4A1P11-201ENST00000451239 222 ntBASIC4.4□□□□□ -1.71
LHX1P48742 RPL37P3-201ENST00000456825 293 ntBASIC4.4□□□□□ -1.71
LHX1P48742 AC079804.1-201ENST00000461922 436 ntBASIC4.4□□□□□ -1.71
LHX1P48742 AC119751.4-201ENST00000507498 357 ntBASIC4.4□□□□□ -1.71
LHX1P48742 AC093824.1-201ENST00000508796 343 ntBASIC4.4□□□□□ -1.71
LHX1P48742 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.4□□□□□ -1.71
LHX1P48742 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.4□□□□□ -1.71
LHX1P48742 COX6B1P6-201ENST00000522347 255 ntBASIC4.4□□□□□ -1.71
LHX1P48742 AC010306.1-201ENST00000523223 1117 ntBASIC4.4□□□□□ -1.71
LHX1P48742 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.4□□□□□ -1.71
LHX1P48742 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.4□□□□□ -1.71
LHX1P48742 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.4□□□□□ -1.71
LHX1P48742 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.4□□□□□ -1.71
LHX1P48742 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.4□□□□□ -1.71
LHX1P48742 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.4□□□□□ -1.71
LHX1P48742 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.4□□□□□ -1.71
LHX1P48742 OR1AB1P-201ENST00000585564 761 ntBASIC4.4□□□□□ -1.71
LHX1P48742 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.4□□□□□ -1.71
LHX1P48742 AC099785.1-201ENST00000605697 437 ntBASIC4.4□□□□□ -1.71
LHX1P48742 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.4□□□□□ -1.71
LHX1P48742 AC112503.1-201ENST00000608436 391 ntBASIC4.4□□□□□ -1.71
LHX1P48742 RNU6-1192P-201ENST00000612197 107 ntBASIC4.4□□□□□ -1.71
LHX1P48742 MIR7151-201ENST00000617477 60 ntBASIC4.4□□□□□ -1.71
LHX1P48742 RNU6-489P-201ENST00000618289 107 ntBASIC4.4□□□□□ -1.71
LHX1P48742 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
LHX1P48742 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
LHX1P48742 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.4□□□□□ -1.71
LHX1P48742 AL353743.4-201ENST00000422653 1547 ntBASIC4.4□□□□□ -1.71
LHX1P48742 AC104446.1-201ENST00000613728 1321 ntBASIC4.4□□□□□ -1.71
LHX1P48742 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LHX1P48742 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LHX1P48742 AC091046.3-201ENST00000631455 1574 ntBASIC4.4□□□□□ -1.71
LHX1P48742 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
LHX1P48742 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LHX1P48742 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LHX1P48742 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
LHX1P48742 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LHX1P48742 RNU5B-1-201ENST00000363286 116 ntBASIC4.39□□□□□ -1.71
LHX1P48742 MIR525-201ENST00000384978 85 ntBASIC4.39□□□□□ -1.71
LHX1P48742 PTP4A1P7-201ENST00000423476 514 ntBASIC4.39□□□□□ -1.71
LHX1P48742 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms