Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFRAP16234 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFRAP16234 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
PDGFRAP16234 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PDGFRAP16234 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PDGFRAP16234 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PDGFRAP16234 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PDGFRAP16234 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.44□□□□□ -1.7
PDGFRAP16234 MTCO1P6-201ENST00000481192 1384 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PDGFRAP16234 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PDGFRAP16234 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.44□□□□□ -1.7
PDGFRAP16234 U3.15-201ENST00000365398 212 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 RNA5SP366-201ENST00000365454 123 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 GCNT6-201ENST00000379591 934 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 SNORA51.12-201ENST00000384448 134 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 SNORD65C-201ENST00000390962 71 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PDGFRAP16234 AL035405.1-201ENST00000400795 710 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.44□□□□□ -1.7
PDGFRAP16234 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.44□□□□□ -1.7
PDGFRAP16234 AC004022.2-201ENST00000413824 193 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.44□□□□□ -1.7
PDGFRAP16234 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PDGFRAP16234 AC114814.2-201ENST00000419195 485 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.44□□□□□ -1.7
PDGFRAP16234 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PDGFRAP16234 HLA-N-201ENST00000437516 135 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PDGFRAP16234 NUTF2P3-201ENST00000448540 384 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.44□□□□□ -1.7
PDGFRAP16234 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.44□□□□□ -1.7
PDGFRAP16234 UQCRHP4-201ENST00000471686 272 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 RPS4XP6-201ENST00000477670 797 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 RPS29P19-201ENST00000479709 171 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 BNIP3P41-201ENST00000503774 571 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 PRELID3BP5-201ENST00000508612 460 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 PARP4P3-201ENST00000510265 317 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 AC008958.1-201ENST00000511047 682 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.44□□□□□ -1.7
PDGFRAP16234 AC108043.1-201ENST00000512696 574 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 RNA5SP519-201ENST00000516480 119 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 CYCSP29-201ENST00000533731 318 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 AC135001.1-201ENST00000544546 283 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PDGFRAP16234 CYP4A43P-201ENST00000568156 121 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.44□□□□□ -1.7
PDGFRAP16234 AP002906.1-201ENST00000603405 233 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.44□□□□□ -1.7
PDGFRAP16234 FAM27D1-201ENST00000612308 341 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PDGFRAP16234 AL731566.2-201ENST00000618971 317 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PDGFRAP16234 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.44□□□□□ -1.7
PDGFRAP16234 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.44□□□□□ -1.7
PDGFRAP16234 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.44□□□□□ -1.7
PDGFRAP16234 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
PDGFRAP16234 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.44□□□□□ -1.7
PDGFRAP16234 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.44□□□□□ -1.7
PDGFRAP16234 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PDGFRAP16234 AC073055.1-201ENST00000456901 1621 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.43□□□□□ -1.7
PDGFRAP16234 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PDGFRAP16234 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFRAP16234 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFRAP16234 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFRAP16234 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PDGFRAP16234 RNU6-207P-201ENST00000384137 107 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 RNU6-932P-201ENST00000391108 106 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 MIR1179-201ENST00000408703 91 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.43□□□□□ -1.7
PDGFRAP16234 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.43□□□□□ -1.7
PDGFRAP16234 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.43□□□□□ -1.7
PDGFRAP16234 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.43□□□□□ -1.7
PDGFRAP16234 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.43□□□□□ -1.7
PDGFRAP16234 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.43□□□□□ -1.7
PDGFRAP16234 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.43□□□□□ -1.7
PDGFRAP16234 RSL24D1P6-201ENST00000426934 401 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 FO393414.1-201ENST00000428697 1184 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 MRPL50P1-201ENST00000431951 384 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFRAP16234 RPS26P40-201ENST00000435209 294 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 UBE2V1P5-201ENST00000440070 405 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFRAP16234 GXYLT1P1-201ENST00000446657 490 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.43□□□□□ -1.7
PDGFRAP16234 AL121877.1-201ENST00000453704 622 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 AC073522.1-201ENST00000483312 377 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 AC105137.1-201ENST00000484355 562 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 AC093267.1-201ENST00000489176 961 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 AC091167.1-201ENST00000492017 396 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.43□□□□□ -1.7
PDGFRAP16234 AC108475.1-201ENST00000507880 950 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 VWA8P1-201ENST00000510889 176 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 KCTD9P2-201ENST00000512203 1013 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 AC112198.4-201ENST00000515450 351 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.43□□□□□ -1.7
PDGFRAP16234 AL161713.1-201ENST00000555538 145 ntBASIC4.43□□□□□ -1.7
PDGFRAP16234 TVP23BP1-201ENST00000557500 617 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms