Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RN7SKP283-201ENST00000517197 270 ntBASIC7.29□□□□□ -1.24
RNF40O75150 NPM1P42-201ENST00000560329 862 ntBASIC7.29□□□□□ -1.24
RNF40O75150 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC7.29□□□□□ -1.24
RNF40O75150 LARP7P2-201ENST00000575306 125 ntBASIC7.29□□□□□ -1.24
RNF40O75150 MIR5583-1-201ENST00000580941 59 ntBASIC7.29□□□□□ -1.24
RNF40O75150 uc_338.12-201ENST00000616344 181 ntBASIC7.29□□□□□ -1.24
RNF40O75150 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.29□□□□□ -1.24
RNF40O75150 U6.101-201ENST00000637707 76 ntBASIC7.29□□□□□ -1.24
RNF40O75150 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RNF40O75150 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.29□□□□□ -1.24
RNF40O75150 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
RNF40O75150 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.29□□□□□ -1.24
RNF40O75150 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
RNF40O75150 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RNF40O75150 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RNF40O75150 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
RNF40O75150 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RNF40O75150 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RNF40O75150 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RNF40O75150 AC119674.1-204ENST00000641348 1343 ntBASIC7.28□□□□□ -1.24
RNF40O75150 AC010168.2-201ENST00000562691 5428 ntBASIC7.28□□□□□ -1.24
RNF40O75150 AC007114.2-201ENST00000576014 4281 ntBASIC7.28□□□□□ -1.24
RNF40O75150 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF40O75150 AC009779.8-201ENST00000641684 4384 ntBASIC7.28□□□□□ -1.24
RNF40O75150 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.28□□□□□ -1.24
RNF40O75150 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF40O75150 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RNF40O75150 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF40O75150 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.28□□□□□ -1.24
RNF40O75150 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF40O75150 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC7.28□□□□□ -1.24
RNF40O75150 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.28□□□□□ -1.24
RNF40O75150 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RNF40O75150 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC7.28□□□□□ -1.24
RNF40O75150 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
RNF40O75150 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF40O75150 HSPE1P11-201ENST00000339579 310 ntBASIC7.28□□□□□ -1.24
RNF40O75150 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF40O75150 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF40O75150 Y_RNA.404-201ENST00000383978 102 ntBASIC7.28□□□□□ -1.24
RNF40O75150 RNU6-187P-201ENST00000384139 106 ntBASIC7.28□□□□□ -1.24
RNF40O75150 AL033519.1-201ENST00000407266 307 ntBASIC7.28□□□□□ -1.24
RNF40O75150 RN7SKP271-201ENST00000410528 320 ntBASIC7.28□□□□□ -1.24
RNF40O75150 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.28□□□□□ -1.24
RNF40O75150 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF40O75150 AC243428.1-201ENST00000421099 264 ntBASIC7.28□□□□□ -1.24
RNF40O75150 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC7.28□□□□□ -1.24
RNF40O75150 PDSS1P1-201ENST00000422953 1114 ntBASIC7.28□□□□□ -1.24
RNF40O75150 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.28□□□□□ -1.24
RNF40O75150 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF40O75150 RPS17P8-201ENST00000434525 335 ntBASIC7.28□□□□□ -1.24
RNF40O75150 AC104698.1-201ENST00000435671 276 ntBASIC7.28□□□□□ -1.24
RNF40O75150 PRDX1P1-201ENST00000449329 596 ntBASIC7.28□□□□□ -1.24
RNF40O75150 AC112492.4-201ENST00000456549 352 ntBASIC7.28□□□□□ -1.24
RNF40O75150 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.28□□□□□ -1.24
RNF40O75150 AC103987.1-201ENST00000473394 348 ntBASIC7.28□□□□□ -1.24
RNF40O75150 FO393415.2-201ENST00000480085 343 ntBASIC7.28□□□□□ -1.24
RNF40O75150 RPL23AP41-201ENST00000484754 458 ntBASIC7.28□□□□□ -1.24
RNF40O75150 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC7.28□□□□□ -1.24
RNF40O75150 AC138517.1-201ENST00000515724 568 ntBASIC7.28□□□□□ -1.24
RNF40O75150 RNU6-470P-201ENST00000515954 104 ntBASIC7.28□□□□□ -1.24
RNF40O75150 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC7.28□□□□□ -1.24
RNF40O75150 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
RNF40O75150 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7.28□□□□□ -1.24
RNF40O75150 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC7.28□□□□□ -1.24
RNF40O75150 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7.28□□□□□ -1.24
RNF40O75150 AC128657.1-201ENST00000549459 145 ntBASIC7.28□□□□□ -1.24
RNF40O75150 HMGB3P26-201ENST00000560051 582 ntBASIC7.28□□□□□ -1.24
RNF40O75150 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF40O75150 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.28□□□□□ -1.24
RNF40O75150 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC7.28□□□□□ -1.24
RNF40O75150 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF40O75150 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF40O75150 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.28□□□□□ -1.24
RNF40O75150 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.28□□□□□ -1.24
RNF40O75150 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RNF40O75150 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
RNF40O75150 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RNF40O75150 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF40O75150 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF40O75150 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.28□□□□□ -1.24
RNF40O75150 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
RNF40O75150 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC7.28□□□□□ -1.24
RNF40O75150 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RNF40O75150 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
RNF40O75150 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.24
RNF40O75150 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RNF40O75150 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7.27□□□□□ -1.25
RNF40O75150 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
RNF40O75150 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RNF40O75150 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
RNF40O75150 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF40O75150 AKAP17BP-201ENST00000431706 2719 ntBASIC7.27□□□□□ -1.25
RNF40O75150 Y_RNA.210-201ENST00000364161 110 ntBASIC7.27□□□□□ -1.25
RNF40O75150 SNORA62.1-201ENST00000364287 154 ntBASIC7.27□□□□□ -1.25
RNF40O75150 SNORA20.1-201ENST00000364790 130 ntBASIC7.27□□□□□ -1.25
RNF40O75150 RNU6-1029P-201ENST00000384109 107 ntBASIC7.27□□□□□ -1.25
RNF40O75150 Y_RNA.518-201ENST00000384552 113 ntBASIC7.27□□□□□ -1.25
RNF40O75150 MIR558-201ENST00000384920 94 ntBASIC7.27□□□□□ -1.25
RNF40O75150 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms