Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 USP9YP24-201ENST00000434374 697 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 USP9YP17-201ENST00000444617 696 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 TPT1P12-201ENST00000448968 492 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 AC010469.1-201ENST00000463864 576 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 RPL5P30-201ENST00000465511 891 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 RPL6P9-201ENST00000466502 859 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 RPL35AP15-201ENST00000468042 339 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 AC109327.1-201ENST00000471666 403 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 RN7SL860P-201ENST00000473738 223 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 AC083829.1-201ENST00000503756 657 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 RNU6-311P-201ENST00000516224 102 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 RNU6-1004P-201ENST00000516584 111 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 RNU6-1028P-201ENST00000517164 93 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 MTND2P38-201ENST00000522536 667 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 PSMB7P1-201ENST00000556349 514 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 MIR4716-201ENST00000579628 84 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 KPNA2P3-201ENST00000584190 848 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 AC022022.2-201ENST00000602989 360 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 AP002906.1-201ENST00000603405 233 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 AC025811.1-201ENST00000604312 472 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 FRG1HP-204ENST00000617940 757 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 AP002791.1-201ENST00000623291 381 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 AC140479.6-201ENST00000633535 357 ntBASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNX9Q9Y5X1 AL592437.2-201ENST00000421655 2434 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 MTND4P8-201ENST00000514997 1362 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AC096656.1-201ENST00000623826 1364 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 MTCO1P18-201ENST00000455518 1419 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 RNU6-236P-201ENST00000363886 106 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 RNU6-906P-201ENST00000384700 70 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 SNORD65C-201ENST00000390962 71 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 MCTS2P-201ENST00000394552 546 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 SNORA74C-2-201ENST00000411179 201 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 LIPT1P1-201ENST00000415870 1186 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 KRR1P1-201ENST00000419430 803 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AC073069.1-201ENST00000428657 441 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 HSFY3P-201ENST00000444242 1191 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 SEPT14P24-201ENST00000447236 180 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 Z73417.1-201ENST00000447373 778 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AC004022.1-201ENST00000447766 1066 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 RPS4XP6-201ENST00000477670 797 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AC093534.1-201ENST00000504977 132 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 MYL12AP1-201ENST00000518490 515 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 OR5AK3P-201ENST00000527486 1297 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AC023538.1-201ENST00000534576 736 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 TRAV8-5-201ENST00000537369 341 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AC008083.2-201ENST00000546707 476 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AC087897.1-201ENST00000550134 156 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AC023575.1-201ENST00000580510 358 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 ELOCP35-201ENST00000604289 336 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 Z82195.1-201ENST00000604558 398 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AC005962.2-201ENST00000611427 652 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AL021997.2-201ENST00000615674 271 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AC009318.3-201ENST00000616916 503 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 MIR6830-201ENST00000636015 70 ntBASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 FP325313.1-201ENST00000638228 703 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms