Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 RPS7P7-201ENST00000463499 571 ntBASIC3.95□□□□□ -1.78
RNF6Q9Y252 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.95□□□□□ -1.78
RNF6Q9Y252 MTND3P24-201ENST00000506306 329 ntBASIC3.95□□□□□ -1.78
RNF6Q9Y252 AC108475.1-201ENST00000507880 950 ntBASIC3.95□□□□□ -1.78
RNF6Q9Y252 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.95□□□□□ -1.78
RNF6Q9Y252 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.95□□□□□ -1.78
RNF6Q9Y252 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.95□□□□□ -1.78
RNF6Q9Y252 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF6Q9Y252 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF6Q9Y252 AL352979.3-201ENST00000553515 247 ntBASIC3.95□□□□□ -1.78
RNF6Q9Y252 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.95□□□□□ -1.78
RNF6Q9Y252 AC012254.4-201ENST00000588843 273 ntBASIC3.95□□□□□ -1.78
RNF6Q9Y252 AC093227.2-201ENST00000589357 285 ntBASIC3.95□□□□□ -1.78
RNF6Q9Y252 AC020914.4-201ENST00000597690 277 ntBASIC3.95□□□□□ -1.78
RNF6Q9Y252 HMGB1P50-201ENST00000605814 607 ntBASIC3.95□□□□□ -1.78
RNF6Q9Y252 AC064801.1-201ENST00000612025 407 ntBASIC3.95□□□□□ -1.78
RNF6Q9Y252 uc_338.13-201ENST00000618243 179 ntBASIC3.95□□□□□ -1.78
RNF6Q9Y252 AC020923.1-201ENST00000624021 917 ntBASIC3.95□□□□□ -1.78
RNF6Q9Y252 AL356094.1-201ENST00000624663 1212 ntBASIC3.95□□□□□ -1.78
RNF6Q9Y252 RNA5SP196-201ENST00000625967 102 ntBASIC3.95□□□□□ -1.78
RNF6Q9Y252 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RNF6Q9Y252 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF6Q9Y252 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.95□□□□□ -1.78
RNF6Q9Y252 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF6Q9Y252 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
RNF6Q9Y252 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF6Q9Y252 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF6Q9Y252 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF6Q9Y252 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.94□□□□□ -1.78
RNF6Q9Y252 AC022893.2-201ENST00000564832 3296 ntBASIC3.94□□□□□ -1.78
RNF6Q9Y252 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
RNF6Q9Y252 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.94□□□□□ -1.78
RNF6Q9Y252 AC027287.1-201ENST00000553115 1453 ntBASIC3.94□□□□□ -1.78
RNF6Q9Y252 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RNF6Q9Y252 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF6Q9Y252 AC083899.2-201ENST00000423285 1376 ntBASIC3.94□□□□□ -1.78
RNF6Q9Y252 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF6Q9Y252 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RNF6Q9Y252 MIR331-201ENST00000362302 94 ntBASIC3.94□□□□□ -1.78
RNF6Q9Y252 RNU1-132P-201ENST00000364300 164 ntBASIC3.94□□□□□ -1.78
RNF6Q9Y252 RNU1-13P-201ENST00000384499 162 ntBASIC3.94□□□□□ -1.78
RNF6Q9Y252 MIR134-201ENST00000385258 73 ntBASIC3.94□□□□□ -1.78
RNF6Q9Y252 HSPD1P16-201ENST00000402302 394 ntBASIC3.94□□□□□ -1.78
RNF6Q9Y252 AL022722.2-201ENST00000402519 180 ntBASIC3.94□□□□□ -1.78
RNF6Q9Y252 AL603766.1-201ENST00000407763 664 ntBASIC3.94□□□□□ -1.78
RNF6Q9Y252 AL161631.1-201ENST00000417933 486 ntBASIC3.94□□□□□ -1.78
RNF6Q9Y252 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.94□□□□□ -1.78
RNF6Q9Y252 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.94□□□□□ -1.78
RNF6Q9Y252 YWHAQP9-201ENST00000445891 512 ntBASIC3.94□□□□□ -1.78
RNF6Q9Y252 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.94□□□□□ -1.78
RNF6Q9Y252 RPL7P31-201ENST00000450192 724 ntBASIC3.94□□□□□ -1.78
RNF6Q9Y252 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.94□□□□□ -1.78
RNF6Q9Y252 AC091153.1-201ENST00000466297 402 ntBASIC3.94□□□□□ -1.78
RNF6Q9Y252 FTH1P24-201ENST00000503502 462 ntBASIC3.94□□□□□ -1.78
RNF6Q9Y252 MTATP6P22-201ENST00000507369 598 ntBASIC3.94□□□□□ -1.78
RNF6Q9Y252 NDUFB4P12-201ENST00000513465 390 ntBASIC3.94□□□□□ -1.78
RNF6Q9Y252 AC133963.2-201ENST00000513686 578 ntBASIC3.94□□□□□ -1.78
RNF6Q9Y252 COX6B1P6-201ENST00000522347 255 ntBASIC3.94□□□□□ -1.78
RNF6Q9Y252 AC022790.1-201ENST00000522872 204 ntBASIC3.94□□□□□ -1.78
RNF6Q9Y252 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.94□□□□□ -1.78
RNF6Q9Y252 OR4A2P-201ENST00000527276 913 ntBASIC3.94□□□□□ -1.78
RNF6Q9Y252 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.94□□□□□ -1.78
RNF6Q9Y252 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.94□□□□□ -1.78
RNF6Q9Y252 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.94□□□□□ -1.78
RNF6Q9Y252 AC006946.3-201ENST00000609791 756 ntBASIC3.94□□□□□ -1.78
RNF6Q9Y252 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.94□□□□□ -1.78
RNF6Q9Y252 AL590396.2-201ENST00000636511 1041 ntBASIC3.94□□□□□ -1.78
RNF6Q9Y252 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.94□□□□□ -1.78
RNF6Q9Y252 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
RNF6Q9Y252 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF6Q9Y252 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF6Q9Y252 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF6Q9Y252 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RNF6Q9Y252 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF6Q9Y252 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF6Q9Y252 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
RNF6Q9Y252 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF6Q9Y252 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNF6Q9Y252 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.93□□□□□ -1.78
RNF6Q9Y252 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF6Q9Y252 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.93□□□□□ -1.78
RNF6Q9Y252 OR52E6-202ENST00000379946 954 ntBASIC3.93□□□□□ -1.78
RNF6Q9Y252 RNA5SP317-201ENST00000410176 116 ntBASIC3.93□□□□□ -1.78
RNF6Q9Y252 RNA5SP311-201ENST00000411290 116 ntBASIC3.93□□□□□ -1.78
RNF6Q9Y252 MTND2P15-201ENST00000418575 892 ntBASIC3.93□□□□□ -1.78
RNF6Q9Y252 CEACAMP1-201ENST00000434624 1035 ntBASIC3.93□□□□□ -1.78
RNF6Q9Y252 AL359073.1-201ENST00000448036 403 ntBASIC3.93□□□□□ -1.78
RNF6Q9Y252 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.93□□□□□ -1.78
RNF6Q9Y252 RPL7P22-201ENST00000466005 733 ntBASIC3.93□□□□□ -1.78
RNF6Q9Y252 AL035404.1-201ENST00000497982 568 ntBASIC3.93□□□□□ -1.78
RNF6Q9Y252 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.93□□□□□ -1.78
RNF6Q9Y252 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.93□□□□□ -1.78
RNF6Q9Y252 RNA5SP315-201ENST00000516340 116 ntBASIC3.93□□□□□ -1.78
RNF6Q9Y252 RNA5SP312-201ENST00000517068 116 ntBASIC3.93□□□□□ -1.78
RNF6Q9Y252 TRAV8-5-201ENST00000537369 341 ntBASIC3.93□□□□□ -1.78
RNF6Q9Y252 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.93□□□□□ -1.78
RNF6Q9Y252 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.93□□□□□ -1.78
RNF6Q9Y252 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNF6Q9Y252 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.93□□□□□ -1.78
RNF6Q9Y252 AL392048.1-201ENST00000613946 534 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms