Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.8□□□□□ -1.8
CISHQ9NSE2 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.8□□□□□ -1.8
CISHQ9NSE2 AC006946.3-201ENST00000609791 756 ntBASIC3.8□□□□□ -1.8
CISHQ9NSE2 AP003355.3-201ENST00000623465 114 ntBASIC3.8□□□□□ -1.8
CISHQ9NSE2 AC009093.8-201ENST00000641769 292 ntBASIC3.8□□□□□ -1.8
CISHQ9NSE2 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CISHQ9NSE2 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.8□□□□□ -1.8
CISHQ9NSE2 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CISHQ9NSE2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
CISHQ9NSE2 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CISHQ9NSE2 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.79□□□□□ -1.8
CISHQ9NSE2 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CISHQ9NSE2 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.79□□□□□ -1.8
CISHQ9NSE2 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CISHQ9NSE2 PTMAP2-201ENST00000397627 327 ntBASIC3.79□□□□□ -1.8
CISHQ9NSE2 RN7SKP53-201ENST00000411337 315 ntBASIC3.79□□□□□ -1.8
CISHQ9NSE2 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.79□□□□□ -1.8
CISHQ9NSE2 MTCO1P51-201ENST00000427672 1060 ntBASIC3.79□□□□□ -1.8
CISHQ9NSE2 GOT2P5-201ENST00000433995 546 ntBASIC3.79□□□□□ -1.8
CISHQ9NSE2 AL353597.2-202ENST00000434901 373 ntBASIC3.79□□□□□ -1.8
CISHQ9NSE2 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.79□□□□□ -1.8
CISHQ9NSE2 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.79□□□□□ -1.8
CISHQ9NSE2 MTND6P32-201ENST00000457611 483 ntBASIC3.79□□□□□ -1.8
CISHQ9NSE2 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.79□□□□□ -1.8
CISHQ9NSE2 AC026403.1-201ENST00000518938 295 ntBASIC3.79□□□□□ -1.8
CISHQ9NSE2 AP006245.1-201ENST00000522549 120 ntBASIC3.79□□□□□ -1.8
CISHQ9NSE2 AP000926.4-201ENST00000527351 454 ntBASIC3.79□□□□□ -1.8
CISHQ9NSE2 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CISHQ9NSE2 AC068446.3-201ENST00000555285 382 ntBASIC3.79□□□□□ -1.8
CISHQ9NSE2 RMST_9.1-201ENST00000619945 193 ntBASIC3.79□□□□□ -1.8
CISHQ9NSE2 U4.6-201ENST00000621618 127 ntBASIC3.79□□□□□ -1.8
CISHQ9NSE2 AC034229.5-201ENST00000624258 185 ntBASIC3.79□□□□□ -1.8
CISHQ9NSE2 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.79□□□□□ -1.8
CISHQ9NSE2 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CISHQ9NSE2 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.78□□□□□ -1.8
CISHQ9NSE2 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CISHQ9NSE2 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CISHQ9NSE2 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.78□□□□□ -1.8
CISHQ9NSE2 RNA5SP235-201ENST00000365411 114 ntBASIC3.78□□□□□ -1.8
CISHQ9NSE2 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.78□□□□□ -1.8
CISHQ9NSE2 GCNT6-201ENST00000379591 934 ntBASIC3.78□□□□□ -1.8
CISHQ9NSE2 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CISHQ9NSE2 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.78□□□□□ -1.8
CISHQ9NSE2 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.78□□□□□ -1.8
CISHQ9NSE2 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.78□□□□□ -1.8
CISHQ9NSE2 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.78□□□□□ -1.8
CISHQ9NSE2 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.78□□□□□ -1.8
CISHQ9NSE2 MTCYBP21-201ENST00000443300 1113 ntBASIC3.78□□□□□ -1.8
CISHQ9NSE2 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.78□□□□□ -1.8
CISHQ9NSE2 RN7SKP13-201ENST00000515933 244 ntBASIC3.78□□□□□ -1.8
CISHQ9NSE2 RNU2-27P-201ENST00000516185 142 ntBASIC3.78□□□□□ -1.8
CISHQ9NSE2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.78□□□□□ -1.8
CISHQ9NSE2 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CISHQ9NSE2 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CISHQ9NSE2 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.78□□□□□ -1.8
CISHQ9NSE2 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.78□□□□□ -1.8
CISHQ9NSE2 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CISHQ9NSE2 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.78□□□□□ -1.8
CISHQ9NSE2 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.78□□□□□ -1.8
CISHQ9NSE2 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.78□□□□□ -1.8
CISHQ9NSE2 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CISHQ9NSE2 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CISHQ9NSE2 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CISHQ9NSE2 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.78□□□□□ -1.81
CISHQ9NSE2 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.78□□□□□ -1.81
CISHQ9NSE2 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CISHQ9NSE2 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CISHQ9NSE2 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CISHQ9NSE2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CISHQ9NSE2 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.77□□□□□ -1.81
CISHQ9NSE2 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.77□□□□□ -1.81
CISHQ9NSE2 AC068647.1-201ENST00000489539 2265 ntBASIC3.77□□□□□ -1.81
CISHQ9NSE2 FRG1CP-201ENST00000358464 769 ntBASIC3.77□□□□□ -1.81
CISHQ9NSE2 SNORA62.3-201ENST00000365110 153 ntBASIC3.77□□□□□ -1.81
CISHQ9NSE2 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CISHQ9NSE2 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CISHQ9NSE2 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.77□□□□□ -1.81
CISHQ9NSE2 AC017079.2-201ENST00000416102 485 ntBASIC3.77□□□□□ -1.81
CISHQ9NSE2 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.77□□□□□ -1.81
CISHQ9NSE2 UBE2V2P4-201ENST00000447495 259 ntBASIC3.77□□□□□ -1.81
CISHQ9NSE2 AL157884.3-201ENST00000448273 1184 ntBASIC3.77□□□□□ -1.81
CISHQ9NSE2 AL162388.1-201ENST00000450912 352 ntBASIC3.77□□□□□ -1.81
CISHQ9NSE2 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.77□□□□□ -1.81
CISHQ9NSE2 SNORA84-201ENST00000459229 133 ntBASIC3.77□□□□□ -1.81
CISHQ9NSE2 RN7SL594P-201ENST00000470590 287 ntBASIC3.77□□□□□ -1.81
CISHQ9NSE2 AC023598.1-201ENST00000472521 361 ntBASIC3.77□□□□□ -1.81
CISHQ9NSE2 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.77□□□□□ -1.81
CISHQ9NSE2 SNORA67.7-201ENST00000516664 135 ntBASIC3.77□□□□□ -1.81
CISHQ9NSE2 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.77□□□□□ -1.81
CISHQ9NSE2 VTA1P2-201ENST00000520205 911 ntBASIC3.77□□□□□ -1.81
CISHQ9NSE2 AC090819.1-201ENST00000523800 1111 ntBASIC3.77□□□□□ -1.81
CISHQ9NSE2 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.77□□□□□ -1.81
CISHQ9NSE2 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.77□□□□□ -1.81
CISHQ9NSE2 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.77□□□□□ -1.81
CISHQ9NSE2 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.77□□□□□ -1.81
CISHQ9NSE2 MIR4738-201ENST00000579134 87 ntBASIC3.77□□□□□ -1.81
CISHQ9NSE2 MIR3158-1-201ENST00000583596 81 ntBASIC3.77□□□□□ -1.81
CISHQ9NSE2 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.77□□□□□ -1.81
CISHQ9NSE2 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CISHQ9NSE2 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms