Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RPL23AP32-201ENST00000395315 459 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 DHFRP6-201ENST00000401776 268 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 RNU6-1148P-201ENST00000410992 104 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 AC127391.1-201ENST00000411737 98 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 CBX1P4-201ENST00000439415 457 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 Z80107.2-201ENST00000445127 392 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 CBWD4P-201ENST00000445695 655 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 AC002553.3-201ENST00000453002 341 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 HIGD1AP8-201ENST00000453927 274 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 RPL31P50-201ENST00000471002 296 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSU72Q9NP77 AP003385.3-201ENST00000472498 287 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 TMEM251P1-201ENST00000503717 318 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 AP005597.4-201ENST00000526762 229 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 OR5M2P-201ENST00000529003 936 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 AC137627.1-201ENST00000545761 289 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 AC008126.1-201ENST00000549019 480 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 ARGFXP2-201ENST00000579304 949 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 MIR3167-201ENST00000579623 85 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 AC008687.2-201ENST00000597865 520 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 KC877982.1-201ENST00000602313 470 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 AC145423.1-201ENST00000605712 336 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 AL133173.2-201ENST00000614270 90 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 GNL2P1-201ENST00000451274 2190 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSU72Q9NP77 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSU72Q9NP77 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSU72Q9NP77 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSU72Q9NP77 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSU72Q9NP77 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSU72Q9NP77 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSU72Q9NP77 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSU72Q9NP77 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSU72Q9NP77 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SSU72Q9NP77 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSU72Q9NP77 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SSU72Q9NP77 SNORA70.6-201ENST00000383934 134 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 RNU6-74P-201ENST00000384235 107 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 RNU6-738P-201ENST00000384531 106 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 SNORD94-201ENST00000386037 137 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 RPL32P23-201ENST00000397237 405 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 RPL12P9-201ENST00000412942 488 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 MRPL50P2-201ENST00000416821 482 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 RPSAP65-201ENST00000429660 595 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 RPS24P8-201ENST00000431490 402 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 GAPDHP19-201ENST00000431768 1005 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 AC128677.1-201ENST00000436016 442 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 RPS15AP9-201ENST00000439856 381 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 FTLP8-201ENST00000446770 267 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 MEMO1P4-201ENST00000453590 386 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 RPS15AP17-201ENST00000470598 390 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 AC005017.1-201ENST00000482002 490 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SSU72Q9NP77 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 MRPL57P6-201ENST00000506570 309 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.8□□□□□ -1.48
SSU72Q9NP77 AC108471.1-201ENST00000513977 287 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 RN7SKP13-201ENST00000515933 244 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 RNU6-202P-201ENST00000515998 96 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 Vault.3-201ENST00000516676 95 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 RNU7-30P-201ENST00000516835 62 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 RNA5SP230-201ENST00000517039 122 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 RNU6-201P-201ENST00000517100 61 ntBASIC5.8□□□□□ -1.48
SSU72Q9NP77 AC022616.6-201ENST00000520479 119 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms