Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 ACTR3P2-201ENST00000439585 1257 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AC004865.1-201ENST00000442276 1003 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 MRPL48P1-201ENST00000445390 636 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 RPL7P59-201ENST00000447700 943 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 RFC5P1-201ENST00000454419 874 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 PNPLA4P1-201ENST00000458328 305 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 RPL7P16-201ENST00000479738 738 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AC020890.1-201ENST00000491837 504 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 WBP1LP4-201ENST00000505043 344 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AC011352.3-201ENST00000505162 593 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 NDUFB5P1-201ENST00000508134 564 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 MTCYBP16-201ENST00000509187 1129 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 MTCO3P28-201ENST00000513351 515 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AC008494.2-201ENST00000514544 370 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 RNU1-6P-201ENST00000516290 144 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AC022882.1-201ENST00000532142 501 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AC005832.3-201ENST00000537929 631 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AC125611.1-201ENST00000549563 229 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AC093249.4-201ENST00000564755 259 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AC010620.1-201ENST00000601088 1102 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AC080013.6-201ENST00000606185 215 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AL023881.1-201ENST00000621088 301 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AL512506.2-201ENST00000624472 458 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 BMS1P21-201ENST00000634565 365 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 AL445487.1-201ENST00000415694 1580 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 SGO1P2-201ENST00000429458 1589 ntBASIC5.38□□□□□ -1.55
CDK5RAP3Q96JB5 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 OR14L1P-202ENST00000641545 3009 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 AC022031.1-201ENST00000585985 2593 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 AL512646.1-201ENST00000269395 1077 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 MTND4P20-201ENST00000424125 869 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 UBE2V1P1-201ENST00000430836 445 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 NMNAT1P2-201ENST00000435192 860 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 UBE2D3P1-201ENST00000436669 444 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 PSMD10P3-201ENST00000437000 448 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 KATNBL1P3-201ENST00000443475 909 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 MTCO2P25-201ENST00000447065 681 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 GAPDHP36-201ENST00000480688 918 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 AC082651.2-201ENST00000496833 166 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 RPF2P2-201ENST00000504693 896 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 AC113430.1-201ENST00000506872 718 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 RNA5SP135-201ENST00000517019 125 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 AL356057.1-201ENST00000533798 831 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 AC084757.1-201ENST00000559987 490 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 GTF2IP8-201ENST00000560687 584 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 AC009117.1-201ENST00000563948 554 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 BGLT3-201ENST00000564523 994 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 RN7SL802P-201ENST00000577858 299 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 RN7SL435P-201ENST00000584418 282 ntBASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.37□□□□□ -1.55
CDK5RAP3Q96JB5 AC093765.1-201ENST00000603758 881 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms