Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.4□□□□□ -1.71
VMP1Q96GC9 AC087477.6-201ENST00000559595 843 ntBASIC4.4□□□□□ -1.71
VMP1Q96GC9 AGGF1P8-201ENST00000562979 1000 ntBASIC4.4□□□□□ -1.71
VMP1Q96GC9 RN7SL652P-201ENST00000577769 300 ntBASIC4.4□□□□□ -1.71
VMP1Q96GC9 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VMP1Q96GC9 AC005520.3-201ENST00000602874 370 ntBASIC4.4□□□□□ -1.71
VMP1Q96GC9 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.4□□□□□ -1.71
VMP1Q96GC9 AP004247.3-201ENST00000608682 624 ntBASIC4.4□□□□□ -1.71
VMP1Q96GC9 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.4□□□□□ -1.71
VMP1Q96GC9 AC105074.1-201ENST00000623380 3095 ntBASIC4.4□□□□□ -1.71
VMP1Q96GC9 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VMP1Q96GC9 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.4□□□□□ -1.71
VMP1Q96GC9 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
VMP1Q96GC9 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
VMP1Q96GC9 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VMP1Q96GC9 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VMP1Q96GC9 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VMP1Q96GC9 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
VMP1Q96GC9 ZNF849P-201ENST00000594711 1566 ntBASIC4.4□□□□□ -1.71
VMP1Q96GC9 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VMP1Q96GC9 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VMP1Q96GC9 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.39□□□□□ -1.71
VMP1Q96GC9 HSPD1P14-201ENST00000432666 1618 ntBASIC4.39□□□□□ -1.71
VMP1Q96GC9 AC010928.1-201ENST00000592477 1447 ntBASIC4.39□□□□□ -1.71
VMP1Q96GC9 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VMP1Q96GC9 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.39□□□□□ -1.71
VMP1Q96GC9 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VMP1Q96GC9 AL590762.2-201ENST00000395798 571 ntBASIC4.39□□□□□ -1.71
VMP1Q96GC9 SSXP10-201ENST00000402595 565 ntBASIC4.39□□□□□ -1.71
VMP1Q96GC9 RPS4XP9-201ENST00000405151 780 ntBASIC4.39□□□□□ -1.71
VMP1Q96GC9 RPS16P5-201ENST00000406501 404 ntBASIC4.39□□□□□ -1.71
VMP1Q96GC9 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.39□□□□□ -1.71
VMP1Q96GC9 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.39□□□□□ -1.71
VMP1Q96GC9 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.39□□□□□ -1.71
VMP1Q96GC9 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.39□□□□□ -1.71
VMP1Q96GC9 RPL36AP15-201ENST00000444514 266 ntBASIC4.39□□□□□ -1.71
VMP1Q96GC9 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.39□□□□□ -1.71
VMP1Q96GC9 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.39□□□□□ -1.71
VMP1Q96GC9 RPS27AP15-201ENST00000447672 466 ntBASIC4.39□□□□□ -1.71
VMP1Q96GC9 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.39□□□□□ -1.71
VMP1Q96GC9 AC010326.1-201ENST00000462726 602 ntBASIC4.39□□□□□ -1.71
VMP1Q96GC9 AC005726.1-201ENST00000494679 427 ntBASIC4.39□□□□□ -1.71
VMP1Q96GC9 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.39□□□□□ -1.71
VMP1Q96GC9 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.39□□□□□ -1.71
VMP1Q96GC9 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.39□□□□□ -1.71
VMP1Q96GC9 AP006289.1-201ENST00000538089 277 ntBASIC4.39□□□□□ -1.71
VMP1Q96GC9 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.39□□□□□ -1.71
VMP1Q96GC9 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.39□□□□□ -1.71
VMP1Q96GC9 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.39□□□□□ -1.71
VMP1Q96GC9 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.39□□□□□ -1.71
VMP1Q96GC9 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.39□□□□□ -1.71
VMP1Q96GC9 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.39□□□□□ -1.71
VMP1Q96GC9 BPTFP1-201ENST00000579209 492 ntBASIC4.39□□□□□ -1.71
VMP1Q96GC9 RN7SL690P-201ENST00000582087 240 ntBASIC4.39□□□□□ -1.71
VMP1Q96GC9 OR1AB1P-201ENST00000585564 761 ntBASIC4.39□□□□□ -1.71
VMP1Q96GC9 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.39□□□□□ -1.71
VMP1Q96GC9 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VMP1Q96GC9 AL592494.2-201ENST00000425455 1548 ntBASIC4.39□□□□□ -1.71
VMP1Q96GC9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
VMP1Q96GC9 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.39□□□□□ -1.71
VMP1Q96GC9 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VMP1Q96GC9 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.39□□□□□ -1.71
VMP1Q96GC9 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VMP1Q96GC9 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
VMP1Q96GC9 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
VMP1Q96GC9 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.38□□□□□ -1.71
VMP1Q96GC9 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.38□□□□□ -1.71
VMP1Q96GC9 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VMP1Q96GC9 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
VMP1Q96GC9 AC079741.1-201ENST00000321498 212 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VMP1Q96GC9 RHOT1P2-201ENST00000366423 333 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.38□□□□□ -1.71
VMP1Q96GC9 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
VMP1Q96GC9 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VMP1Q96GC9 Z98745.1-201ENST00000402553 494 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.38□□□□□ -1.71
VMP1Q96GC9 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.38□□□□□ -1.71
VMP1Q96GC9 RN7SKP106-201ENST00000410832 272 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 AC119751.6-201ENST00000416712 186 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 AC140479.3-201ENST00000418944 1126 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 AC244098.2-201ENST00000422068 99 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 AC006994.1-201ENST00000438212 839 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 GXYLT1P1-201ENST00000446657 490 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 NPM1P49-201ENST00000448027 714 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 AC090142.1-201ENST00000465776 462 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 NCOR1P1-202ENST00000486162 291 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 AC108022.1-201ENST00000493466 478 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.38□□□□□ -1.71
VMP1Q96GC9 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.38□□□□□ -1.71
VMP1Q96GC9 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.38□□□□□ -1.71
VMP1Q96GC9 PPBPP1-201ENST00000510807 373 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 AC104057.1-201ENST00000515547 497 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.38□□□□□ -1.71
VMP1Q96GC9 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.38□□□□□ -1.71
VMP1Q96GC9 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VMP1Q96GC9 OR8K4P-201ENST00000534608 872 ntBASIC4.38□□□□□ -1.71
VMP1Q96GC9 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.38□□□□□ -1.71
VMP1Q96GC9 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.38□□□□□ -1.71
VMP1Q96GC9 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms