Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RNU6-511P-201ENST00000363496 107 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 Y_RNA.493-201ENST00000384422 102 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
HLA-CQ95604 DSTNP4-201ENST00000399472 474 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 BX323014.1-201ENST00000412876 237 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.92□□□□□ -1.3
HLA-CQ95604 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-CQ95604 RPL7P28-201ENST00000437739 740 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 RPL23AP89-201ENST00000439324 255 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 CEACAMP9-201ENST00000442990 513 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 RPL21P89-201ENST00000444021 467 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.92□□□□□ -1.3
HLA-CQ95604 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.92□□□□□ -1.3
HLA-CQ95604 AC023141.9-201ENST00000458734 412 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 ACA64.1-201ENST00000459171 127 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 RPS26P39-201ENST00000469206 341 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 AC108043.1-201ENST00000512696 574 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 RNU2-53P-201ENST00000516257 147 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.92□□□□□ -1.3
HLA-CQ95604 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC6.92□□□□□ -1.3
HLA-CQ95604 AC036111.2-201ENST00000533247 901 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.92□□□□□ -1.3
HLA-CQ95604 AC068993.1-201ENST00000546724 589 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 AC023827.2-201ENST00000566880 1061 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC6.92□□□□□ -1.3
HLA-CQ95604 COX6CP3-201ENST00000580869 223 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 MIR4701-201ENST00000583094 63 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC6.92□□□□□ -1.3
HLA-CQ95604 AC104695.3-201ENST00000604052 296 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 AL355297.3-201ENST00000604082 446 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 AC018889.1-201ENST00000605372 397 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 HSPE1P14-201ENST00000605812 302 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 AL591167.1-201ENST00000607321 456 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 AC211433.2-201ENST00000608433 387 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC6.92□□□□□ -1.3
HLA-CQ95604 AL031666.3-201ENST00000609320 1006 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.92□□□□□ -1.3
HLA-CQ95604 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.92□□□□□ -1.3
HLA-CQ95604 AL138726.1-201ENST00000614873 333 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.92□□□□□ -1.3
HLA-CQ95604 AL357559.1-201ENST00000622228 274 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 MIR6719-201ENST00000622428 87 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 AC011155.2-201ENST00000623202 216 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 AP000843.1-201ENST00000624880 701 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.92□□□□□ -1.3
HLA-CQ95604 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.92□□□□□ -1.3
HLA-CQ95604 U2.22-201ENST00000636441 106 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-CQ95604 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-CQ95604 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
HLA-CQ95604 PWAR1-201ENST00000624188 2414 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.92□□□□□ -1.3
HLA-CQ95604 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.92□□□□□ -1.3
HLA-CQ95604 AC078880.4-201ENST00000617627 1749 ntBASIC6.92□□□□□ -1.3
HLA-CQ95604 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-CQ95604 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-CQ95604 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-CQ95604 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-CQ95604 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-CQ95604 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HLA-CQ95604 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.91□□□□□ -1.3
HLA-CQ95604 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.91□□□□□ -1.3
HLA-CQ95604 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
HLA-CQ95604 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC6.91□□□□□ -1.3
HLA-CQ95604 MTND5P28-201ENST00000438005 1594 ntBASIC6.91□□□□□ -1.3
HLA-CQ95604 AC016582.1-202ENST00000636341 2982 ntBASIC6.91□□□□□ -1.3
HLA-CQ95604 LINC02019-201ENST00000608605 2060 ntBASIC6.91□□□□□ -1.3
HLA-CQ95604 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HLA-CQ95604 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.91□□□□□ -1.3
HLA-CQ95604 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.91□□□□□ -1.3
HLA-CQ95604 AC138627.1-203ENST00000641872 1680 ntBASIC6.91□□□□□ -1.3
HLA-CQ95604 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HLA-CQ95604 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HLA-CQ95604 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC6.91□□□□□ -1.3
HLA-CQ95604 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.91□□□□□ -1.3
HLA-CQ95604 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.91□□□□□ -1.3
HLA-CQ95604 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HLA-CQ95604 RNA5SP443-201ENST00000363083 132 ntBASIC6.91□□□□□ -1.3
HLA-CQ95604 Y_RNA.380-201ENST00000365663 111 ntBASIC6.91□□□□□ -1.3
HLA-CQ95604 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HLA-CQ95604 U3.25-201ENST00000391209 220 ntBASIC6.91□□□□□ -1.3
HLA-CQ95604 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.91□□□□□ -1.3
HLA-CQ95604 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.91□□□□□ -1.3
HLA-CQ95604 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC6.91□□□□□ -1.3
HLA-CQ95604 AC234781.4-201ENST00000419384 244 ntBASIC6.91□□□□□ -1.3
HLA-CQ95604 PSMA6P3-201ENST00000428242 164 ntBASIC6.91□□□□□ -1.3
HLA-CQ95604 YWHAZP8-201ENST00000436935 731 ntBASIC6.91□□□□□ -1.3
HLA-CQ95604 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6.91□□□□□ -1.3
HLA-CQ95604 RPL7P52-201ENST00000449200 742 ntBASIC6.91□□□□□ -1.3
HLA-CQ95604 GSTA11P-201ENST00000452866 669 ntBASIC6.91□□□□□ -1.3
HLA-CQ95604 AC011476.1-201ENST00000466725 307 ntBASIC6.91□□□□□ -1.3
HLA-CQ95604 AC092324.1-201ENST00000468671 324 ntBASIC6.91□□□□□ -1.3
HLA-CQ95604 RN7SL809P-201ENST00000482040 297 ntBASIC6.91□□□□□ -1.3
HLA-CQ95604 ATP5LP5-201ENST00000483050 299 ntBASIC6.91□□□□□ -1.3
HLA-CQ95604 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC6.91□□□□□ -1.3
HLA-CQ95604 AC116337.1-201ENST00000509680 687 ntBASIC6.91□□□□□ -1.3
HLA-CQ95604 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HLA-CQ95604 RNU6-189P-201ENST00000516120 101 ntBASIC6.91□□□□□ -1.3
HLA-CQ95604 RNU6-1143P-201ENST00000516125 104 ntBASIC6.91□□□□□ -1.3
HLA-CQ95604 Y_RNA.708-201ENST00000516950 96 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms