Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC243312.2-201ENST00000623340 601 ntBASIC4.7□□□□□ -1.66
SNED1Q8TER0 AL392088.2-201ENST00000637607 285 ntBASIC4.7□□□□□ -1.66
SNED1Q8TER0 AC119674.1-207ENST00000641355 633 ntBASIC4.7□□□□□ -1.66
SNED1Q8TER0 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SNED1Q8TER0 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SNED1Q8TER0 AP000542.2-201ENST00000623199 6179 ntBASIC4.7□□□□□ -1.66
SNED1Q8TER0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNED1Q8TER0 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SNED1Q8TER0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNED1Q8TER0 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNED1Q8TER0 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.69□□□□□ -1.66
SNED1Q8TER0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNED1Q8TER0 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SNED1Q8TER0 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.69□□□□□ -1.66
SNED1Q8TER0 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNED1Q8TER0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNED1Q8TER0 RNU6-697P-201ENST00000363348 107 ntBASIC4.69□□□□□ -1.66
SNED1Q8TER0 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SNED1Q8TER0 RNU6-883P-201ENST00000384597 107 ntBASIC4.69□□□□□ -1.66
SNED1Q8TER0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNED1Q8TER0 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.69□□□□□ -1.66
SNED1Q8TER0 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.69□□□□□ -1.66
SNED1Q8TER0 AL158156.1-201ENST00000422509 473 ntBASIC4.69□□□□□ -1.66
SNED1Q8TER0 MTCO1P51-201ENST00000427672 1060 ntBASIC4.69□□□□□ -1.66
SNED1Q8TER0 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNED1Q8TER0 RPS3AP46-201ENST00000448352 682 ntBASIC4.69□□□□□ -1.66
SNED1Q8TER0 RPS17P13-201ENST00000448974 407 ntBASIC4.69□□□□□ -1.66
SNED1Q8TER0 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.69□□□□□ -1.66
SNED1Q8TER0 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.69□□□□□ -1.66
SNED1Q8TER0 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.69□□□□□ -1.66
SNED1Q8TER0 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.69□□□□□ -1.66
SNED1Q8TER0 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.69□□□□□ -1.66
SNED1Q8TER0 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.69□□□□□ -1.66
SNED1Q8TER0 AC106782.4-201ENST00000568264 210 ntBASIC4.69□□□□□ -1.66
SNED1Q8TER0 AC079880.2-201ENST00000603790 1213 ntBASIC4.69□□□□□ -1.66
SNED1Q8TER0 AC013244.3-201ENST00000605614 388 ntBASIC4.69□□□□□ -1.66
SNED1Q8TER0 AC243654.2-201ENST00000612843 443 ntBASIC4.69□□□□□ -1.66
SNED1Q8TER0 AC095038.2-201ENST00000621464 1070 ntBASIC4.69□□□□□ -1.66
SNED1Q8TER0 AC124312.6-202ENST00000623624 418 ntBASIC4.69□□□□□ -1.66
SNED1Q8TER0 AC010872.1-201ENST00000624225 675 ntBASIC4.69□□□□□ -1.66
SNED1Q8TER0 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNED1Q8TER0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.68□□□□□ -1.66
SNED1Q8TER0 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.68□□□□□ -1.66
SNED1Q8TER0 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.68□□□□□ -1.66
SNED1Q8TER0 AL035425.3-201ENST00000564206 4996 ntBASIC4.68□□□□□ -1.66
SNED1Q8TER0 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNED1Q8TER0 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNED1Q8TER0 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SNED1Q8TER0 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.68□□□□□ -1.66
SNED1Q8TER0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNED1Q8TER0 RNU1-33P-201ENST00000364249 162 ntBASIC4.68□□□□□ -1.66
SNED1Q8TER0 AF228730.1-201ENST00000397972 663 ntBASIC4.68□□□□□ -1.66
SNED1Q8TER0 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.68□□□□□ -1.66
SNED1Q8TER0 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.68□□□□□ -1.66
SNED1Q8TER0 Z80107.1-201ENST00000436830 412 ntBASIC4.68□□□□□ -1.66
SNED1Q8TER0 AC092641.1-201ENST00000440229 772 ntBASIC4.68□□□□□ -1.66
SNED1Q8TER0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.68□□□□□ -1.66
SNED1Q8TER0 MTATP6P26-201ENST00000445926 662 ntBASIC4.68□□□□□ -1.66
SNED1Q8TER0 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.68□□□□□ -1.66
SNED1Q8TER0 FTH1P25-201ENST00000447665 469 ntBASIC4.68□□□□□ -1.66
SNED1Q8TER0 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.68□□□□□ -1.66
SNED1Q8TER0 LARP7P4-201ENST00000481075 878 ntBASIC4.68□□□□□ -1.66
SNED1Q8TER0 AC082651.2-201ENST00000496833 166 ntBASIC4.68□□□□□ -1.66
SNED1Q8TER0 AC113398.2-201ENST00000507630 558 ntBASIC4.68□□□□□ -1.66
SNED1Q8TER0 PPBPP1-201ENST00000510807 373 ntBASIC4.68□□□□□ -1.66
SNED1Q8TER0 SNORD116-30-201ENST00000516468 85 ntBASIC4.68□□□□□ -1.66
SNED1Q8TER0 AC006960.3-201ENST00000561845 705 ntBASIC4.68□□□□□ -1.66
SNED1Q8TER0 AC104662.1-201ENST00000604448 511 ntBASIC4.68□□□□□ -1.66
SNED1Q8TER0 AC015802.5-201ENST00000607478 399 ntBASIC4.68□□□□□ -1.66
SNED1Q8TER0 AL109659.3-201ENST00000624985 950 ntBASIC4.68□□□□□ -1.66
SNED1Q8TER0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.68□□□□□ -1.66
SNED1Q8TER0 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SNED1Q8TER0 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SNED1Q8TER0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.68□□□□□ -1.66
SNED1Q8TER0 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
SNED1Q8TER0 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNED1Q8TER0 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNED1Q8TER0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.67□□□□□ -1.66
SNED1Q8TER0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.67□□□□□ -1.66
SNED1Q8TER0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.67□□□□□ -1.66
SNED1Q8TER0 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNED1Q8TER0 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.67□□□□□ -1.66
SNED1Q8TER0 AC097713.2-201ENST00000430199 356 ntBASIC4.67□□□□□ -1.66
SNED1Q8TER0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.67□□□□□ -1.66
SNED1Q8TER0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.67□□□□□ -1.66
SNED1Q8TER0 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.67□□□□□ -1.66
SNED1Q8TER0 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.67□□□□□ -1.66
SNED1Q8TER0 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.67□□□□□ -1.66
SNED1Q8TER0 HSPE1P22-201ENST00000456856 327 ntBASIC4.67□□□□□ -1.66
SNED1Q8TER0 BX510359.1-201ENST00000456973 237 ntBASIC4.67□□□□□ -1.66
SNED1Q8TER0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.67□□□□□ -1.66
SNED1Q8TER0 RPS27AP18-201ENST00000515536 459 ntBASIC4.67□□□□□ -1.66
SNED1Q8TER0 MTND2P38-201ENST00000522536 667 ntBASIC4.67□□□□□ -1.66
SNED1Q8TER0 CYP4A43P-201ENST00000568156 121 ntBASIC4.67□□□□□ -1.66
SNED1Q8TER0 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.67□□□□□ -1.66
SNED1Q8TER0 AL135786.2-201ENST00000608422 615 ntBASIC4.67□□□□□ -1.66
SNED1Q8TER0 AC135803.1-201ENST00000608748 565 ntBASIC4.67□□□□□ -1.66
SNED1Q8TER0 AC005858.4-201ENST00000623191 700 ntBASIC4.67□□□□□ -1.66
SNED1Q8TER0 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.67□□□□□ -1.66
SNED1Q8TER0 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms