Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC112198.1-201ENST00000505369 1220 ntBASIC5.4□□□□□ -1.54
VPS8Q8N3P4 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS8Q8N3P4 RPL21P12-201ENST00000559810 515 ntBASIC5.4□□□□□ -1.54
VPS8Q8N3P4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS8Q8N3P4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS8Q8N3P4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS8Q8N3P4 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS8Q8N3P4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS8Q8N3P4 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.4□□□□□ -1.54
VPS8Q8N3P4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
VPS8Q8N3P4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VPS8Q8N3P4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VPS8Q8N3P4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC5.4□□□□□ -1.54
VPS8Q8N3P4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
VPS8Q8N3P4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
VPS8Q8N3P4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VPS8Q8N3P4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
VPS8Q8N3P4 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.4□□□□□ -1.55
VPS8Q8N3P4 RNA5SP50-201ENST00000363731 107 ntBASIC5.4□□□□□ -1.55
VPS8Q8N3P4 RNA5SP235-201ENST00000365411 114 ntBASIC5.4□□□□□ -1.55
VPS8Q8N3P4 AL590609.2-201ENST00000421430 368 ntBASIC5.4□□□□□ -1.55
VPS8Q8N3P4 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.4□□□□□ -1.55
VPS8Q8N3P4 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.4□□□□□ -1.55
VPS8Q8N3P4 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.4□□□□□ -1.55
VPS8Q8N3P4 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.4□□□□□ -1.55
VPS8Q8N3P4 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.4□□□□□ -1.55
VPS8Q8N3P4 AGGF1P3-201ENST00000493675 1213 ntBASIC5.4□□□□□ -1.55
VPS8Q8N3P4 AL358832.1-201ENST00000497800 389 ntBASIC5.4□□□□□ -1.55
VPS8Q8N3P4 PCBP2P3-201ENST00000509726 843 ntBASIC5.4□□□□□ -1.55
VPS8Q8N3P4 AC074250.1-201ENST00000511117 192 ntBASIC5.4□□□□□ -1.55
VPS8Q8N3P4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC5.4□□□□□ -1.55
VPS8Q8N3P4 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.4□□□□□ -1.55
VPS8Q8N3P4 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.4□□□□□ -1.55
VPS8Q8N3P4 MIR4738-201ENST00000579134 87 ntBASIC5.4□□□□□ -1.55
VPS8Q8N3P4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC5.4□□□□□ -1.55
VPS8Q8N3P4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.4□□□□□ -1.55
VPS8Q8N3P4 AC007342.8-201ENST00000623278 678 ntBASIC5.4□□□□□ -1.55
VPS8Q8N3P4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS8Q8N3P4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS8Q8N3P4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS8Q8N3P4 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
VPS8Q8N3P4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
VPS8Q8N3P4 DDX6P1-205ENST00000441966 1436 ntBASIC5.39□□□□□ -1.55
VPS8Q8N3P4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS8Q8N3P4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS8Q8N3P4 Z99755.1-201ENST00000414048 380 ntBASIC5.39□□□□□ -1.55
VPS8Q8N3P4 OR6C64P-201ENST00000419708 825 ntBASIC5.39□□□□□ -1.55
VPS8Q8N3P4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS8Q8N3P4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS8Q8N3P4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS8Q8N3P4 MTCO3P20-201ENST00000454926 688 ntBASIC5.39□□□□□ -1.55
VPS8Q8N3P4 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS8Q8N3P4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS8Q8N3P4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS8Q8N3P4 ELOCP35-201ENST00000604289 336 ntBASIC5.39□□□□□ -1.55
VPS8Q8N3P4 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.39□□□□□ -1.55
VPS8Q8N3P4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.39□□□□□ -1.55
VPS8Q8N3P4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.39□□□□□ -1.55
VPS8Q8N3P4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS8Q8N3P4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS8Q8N3P4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS8Q8N3P4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS8Q8N3P4 CEP170P1-201ENST00000502249 4587 ntBASIC5.38□□□□□ -1.55
VPS8Q8N3P4 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS8Q8N3P4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
VPS8Q8N3P4 MIR23A-201ENST00000385245 73 ntBASIC5.38□□□□□ -1.55
VPS8Q8N3P4 RNA5SP229-201ENST00000410809 99 ntBASIC5.38□□□□□ -1.55
VPS8Q8N3P4 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS8Q8N3P4 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS8Q8N3P4 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS8Q8N3P4 AL591503.2-201ENST00000442314 1005 ntBASIC5.38□□□□□ -1.55
VPS8Q8N3P4 EIF4A1P11-201ENST00000451239 222 ntBASIC5.38□□□□□ -1.55
VPS8Q8N3P4 DSTNP2-201ENST00000504533 515 ntBASIC5.38□□□□□ -1.55
VPS8Q8N3P4 FCF1P8-201ENST00000510322 597 ntBASIC5.38□□□□□ -1.55
VPS8Q8N3P4 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.38□□□□□ -1.55
VPS8Q8N3P4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS8Q8N3P4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.38□□□□□ -1.55
VPS8Q8N3P4 OOSP1P2-201ENST00000579644 351 ntBASIC5.38□□□□□ -1.55
VPS8Q8N3P4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS8Q8N3P4 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS8Q8N3P4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS8Q8N3P4 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS8Q8N3P4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS8Q8N3P4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS8Q8N3P4 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS8Q8N3P4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS8Q8N3P4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS8Q8N3P4 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS8Q8N3P4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS8Q8N3P4 AC109635.6-201ENST00000525487 1113 ntBASIC5.37□□□□□ -1.55
VPS8Q8N3P4 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS8Q8N3P4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS8Q8N3P4 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.37□□□□□ -1.55
VPS8Q8N3P4 AC017100.2-201ENST00000584628 355 ntBASIC5.37□□□□□ -1.55
VPS8Q8N3P4 MIR4276-201ENST00000584832 70 ntBASIC5.37□□□□□ -1.55
VPS8Q8N3P4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS8Q8N3P4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS8Q8N3P4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS8Q8N3P4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS8Q8N3P4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms