Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.96□□□□□ -1.94
HIST1H1AQ02539 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC2.96□□□□□ -1.94
HIST1H1AQ02539 NUTF2P3-201ENST00000448540 384 ntBASIC2.96□□□□□ -1.94
HIST1H1AQ02539 AC098824.1-201ENST00000453565 980 ntBASIC2.96□□□□□ -1.94
HIST1H1AQ02539 TRBV8-2-201ENST00000475637 270 ntBASIC2.96□□□□□ -1.94
HIST1H1AQ02539 AL132838.2-201ENST00000492041 314 ntBASIC2.96□□□□□ -1.94
HIST1H1AQ02539 RPL7P24-201ENST00000493052 752 ntBASIC2.96□□□□□ -1.94
HIST1H1AQ02539 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HIST1H1AQ02539 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HIST1H1AQ02539 RN7SKP60-201ENST00000516985 239 ntBASIC2.96□□□□□ -1.94
HIST1H1AQ02539 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC2.96□□□□□ -1.94
HIST1H1AQ02539 IGHV3-76-201ENST00000522465 295 ntBASIC2.96□□□□□ -1.94
HIST1H1AQ02539 AP003730.1-201ENST00000524605 285 ntBASIC2.96□□□□□ -1.94
HIST1H1AQ02539 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC2.96□□□□□ -1.94
HIST1H1AQ02539 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HIST1H1AQ02539 AL139174.1-201ENST00000531489 886 ntBASIC2.96□□□□□ -1.94
HIST1H1AQ02539 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC2.96□□□□□ -1.94
HIST1H1AQ02539 AC091516.1-201ENST00000549191 703 ntBASIC2.96□□□□□ -1.94
HIST1H1AQ02539 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC2.96□□□□□ -1.94
HIST1H1AQ02539 CYP2C60P-201ENST00000566088 139 ntBASIC2.96□□□□□ -1.94
HIST1H1AQ02539 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC2.96□□□□□ -1.94
HIST1H1AQ02539 MIR4425-201ENST00000580572 84 ntBASIC2.96□□□□□ -1.94
HIST1H1AQ02539 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC2.96□□□□□ -1.94
HIST1H1AQ02539 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC2.96□□□□□ -1.94
HIST1H1AQ02539 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HIST1H1AQ02539 AC006116.5-201ENST00000591936 559 ntBASIC2.96□□□□□ -1.94
HIST1H1AQ02539 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC2.96□□□□□ -1.94
HIST1H1AQ02539 AC011816.2-201ENST00000607089 556 ntBASIC2.96□□□□□ -1.94
HIST1H1AQ02539 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.96□□□□□ -1.94
HIST1H1AQ02539 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.96□□□□□ -1.94
HIST1H1AQ02539 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HIST1H1AQ02539 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HIST1H1AQ02539 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
HIST1H1AQ02539 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 RNA5SP399-201ENST00000364003 117 ntBASIC2.95□□□□□ -1.94
HIST1H1AQ02539 ENSAP1-201ENST00000392855 326 ntBASIC2.95□□□□□ -1.94
HIST1H1AQ02539 RNU4-6P-201ENST00000410804 122 ntBASIC2.95□□□□□ -1.94
HIST1H1AQ02539 RN7SKP33-201ENST00000410942 340 ntBASIC2.95□□□□□ -1.94
HIST1H1AQ02539 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 RPL31P45-201ENST00000419532 356 ntBASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 COX6CP15-201ENST00000426313 211 ntBASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AL691449.1-201ENST00000426570 421 ntBASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 NPM1P34-201ENST00000428821 893 ntBASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 UBE2V2P1-201ENST00000434717 398 ntBASIC2.95□□□□□ -1.94
HIST1H1AQ02539 CACYBPP1-201ENST00000438592 684 ntBASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AC006539.3-201ENST00000454258 129 ntBASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AP002884.2-201ENST00000471647 395 ntBASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AC110792.1-201ENST00000491826 472 ntBASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 MRPL49P2-201ENST00000521066 465 ntBASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AC138701.1-201ENST00000524329 714 ntBASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 OR4A12P-201ENST00000530847 918 ntBASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AL845331.3-202ENST00000562856 261 ntBASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 KPNA2P3-201ENST00000584190 848 ntBASIC2.95□□□□□ -1.94
HIST1H1AQ02539 MIR3138-201ENST00000585238 82 ntBASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 BANCR-201ENST00000624238 473 ntTSL 2 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 CCT8P1-201ENST00000413611 1657 ntBASIC2.95□□□□□ -1.94
HIST1H1AQ02539 API5-210ENST00000534600 1760 ntTSL 5 BASIC2.95□□□□□ -1.94
HIST1H1AQ02539 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 TANK-205ENST00000405852 2155 ntTSL 5 BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 RNU1-32P-201ENST00000363937 159 ntBASIC2.94□□□□□ -1.94
HIST1H1AQ02539 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC2.94□□□□□ -1.94
HIST1H1AQ02539 RPS29P31-201ENST00000446147 164 ntBASIC2.94□□□□□ -1.94
HIST1H1AQ02539 RPS11P1-201ENST00000451072 473 ntBASIC2.94□□□□□ -1.94
HIST1H1AQ02539 AC005229.2-201ENST00000456995 399 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms