Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC006539.3-201ENST00000454258 129 ntBASIC3.31□□□□□ -1.88
UBA52P62987 AC005229.2-201ENST00000456995 399 ntBASIC3.31□□□□□ -1.88
UBA52P62987 RPL7P15-201ENST00000461190 712 ntBASIC3.31□□□□□ -1.88
UBA52P62987 RPL7P47-201ENST00000497299 556 ntBASIC3.31□□□□□ -1.88
UBA52P62987 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.31□□□□□ -1.88
UBA52P62987 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.31□□□□□ -1.88
UBA52P62987 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.31□□□□□ -1.88
UBA52P62987 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.31□□□□□ -1.88
UBA52P62987 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.31□□□□□ -1.88
UBA52P62987 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.31□□□□□ -1.88
UBA52P62987 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.31□□□□□ -1.88
UBA52P62987 AC106785.3-201ENST00000564064 847 ntBASIC3.31□□□□□ -1.88
UBA52P62987 AC022968.1-201ENST00000567372 442 ntBASIC3.31□□□□□ -1.88
UBA52P62987 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.31□□□□□ -1.88
UBA52P62987 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.31□□□□□ -1.88
UBA52P62987 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.31□□□□□ -1.88
UBA52P62987 AC011492.1-201ENST00000600023 315 ntBASIC3.31□□□□□ -1.88
UBA52P62987 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.31□□□□□ -1.88
UBA52P62987 AL133247.2-201ENST00000603236 482 ntBASIC3.31□□□□□ -1.88
UBA52P62987 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.31□□□□□ -1.88
UBA52P62987 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.31□□□□□ -1.88
UBA52P62987 AL139089.1-201ENST00000620372 975 ntBASIC3.31□□□□□ -1.88
UBA52P62987 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.31□□□□□ -1.88
UBA52P62987 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBA52P62987 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
UBA52P62987 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
UBA52P62987 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.31□□□□□ -1.88
UBA52P62987 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
UBA52P62987 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.3□□□□□ -1.88
UBA52P62987 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.3□□□□□ -1.88
UBA52P62987 AL592437.2-201ENST00000421655 2434 ntBASIC3.3□□□□□ -1.88
UBA52P62987 Y_RNA.333-201ENST00000365274 102 ntBASIC3.3□□□□□ -1.88
UBA52P62987 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.3□□□□□ -1.88
UBA52P62987 HSPE1P12-201ENST00000412576 301 ntBASIC3.3□□□□□ -1.88
UBA52P62987 LIPT1P1-201ENST00000415870 1186 ntBASIC3.3□□□□□ -1.88
UBA52P62987 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.3□□□□□ -1.88
UBA52P62987 RPS15AP6-201ENST00000420703 385 ntBASIC3.3□□□□□ -1.88
UBA52P62987 YME1L1P1-201ENST00000429435 297 ntBASIC3.3□□□□□ -1.88
UBA52P62987 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
UBA52P62987 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.3□□□□□ -1.88
UBA52P62987 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.3□□□□□ -1.88
UBA52P62987 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.3□□□□□ -1.88
UBA52P62987 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.3□□□□□ -1.88
UBA52P62987 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.3□□□□□ -1.88
UBA52P62987 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.3□□□□□ -1.88
UBA52P62987 PAICSP4-201ENST00000517543 1253 ntBASIC3.3□□□□□ -1.88
UBA52P62987 TRMT10BP1-201ENST00000519377 943 ntBASIC3.3□□□□□ -1.88
UBA52P62987 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.3□□□□□ -1.88
UBA52P62987 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.3□□□□□ -1.88
UBA52P62987 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.3□□□□□ -1.88
UBA52P62987 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.3□□□□□ -1.88
UBA52P62987 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
UBA52P62987 AL389895.1-201ENST00000554127 252 ntBASIC3.3□□□□□ -1.88
UBA52P62987 MIR3186-201ENST00000577404 85 ntBASIC3.3□□□□□ -1.88
UBA52P62987 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.3□□□□□ -1.88
UBA52P62987 AL451044.1-201ENST00000604867 238 ntBASIC3.3□□□□□ -1.88
UBA52P62987 AL592436.1-201ENST00000605135 558 ntBASIC3.3□□□□□ -1.88
UBA52P62987 MIR7151-201ENST00000617477 60 ntBASIC3.3□□□□□ -1.88
UBA52P62987 AL354798.1-201ENST00000622505 329 ntBASIC3.3□□□□□ -1.88
UBA52P62987 AC020978.9-201ENST00000624380 1141 ntBASIC3.3□□□□□ -1.88
UBA52P62987 AC012442.3-202ENST00000636742 206 ntBASIC3.3□□□□□ -1.88
UBA52P62987 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
UBA52P62987 AC116667.1-201ENST00000604855 2072 ntBASIC3.3□□□□□ -1.88
UBA52P62987 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
UBA52P62987 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
UBA52P62987 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
UBA52P62987 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
UBA52P62987 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
UBA52P62987 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.29□□□□□ -1.88
UBA52P62987 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
UBA52P62987 MIR7-3-201ENST00000384898 110 ntBASIC3.29□□□□□ -1.88
UBA52P62987 AL391417.1-201ENST00000404100 426 ntBASIC3.29□□□□□ -1.88
UBA52P62987 RN7SKP177-201ENST00000410567 355 ntBASIC3.29□□□□□ -1.88
UBA52P62987 SNORA57.3-201ENST00000411095 141 ntBASIC3.29□□□□□ -1.88
UBA52P62987 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
UBA52P62987 AC114814.2-201ENST00000419195 485 ntBASIC3.29□□□□□ -1.88
UBA52P62987 OR5BE1P-201ENST00000425977 939 ntBASIC3.29□□□□□ -1.88
UBA52P62987 SERPINA7P1-201ENST00000443077 631 ntBASIC3.29□□□□□ -1.88
UBA52P62987 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.29□□□□□ -1.88
UBA52P62987 AC098824.1-201ENST00000453565 980 ntBASIC3.29□□□□□ -1.88
UBA52P62987 RPL7P1-201ENST00000468161 747 ntBASIC3.29□□□□□ -1.88
UBA52P62987 RPL7P9-201ENST00000468715 747 ntBASIC3.29□□□□□ -1.88
UBA52P62987 AL139099.1-201ENST00000497398 403 ntBASIC3.29□□□□□ -1.88
UBA52P62987 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.29□□□□□ -1.88
UBA52P62987 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.29□□□□□ -1.88
UBA52P62987 RNU7-143P-201ENST00000516781 65 ntBASIC3.29□□□□□ -1.88
UBA52P62987 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.29□□□□□ -1.88
UBA52P62987 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.29□□□□□ -1.88
UBA52P62987 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.29□□□□□ -1.88
UBA52P62987 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.29□□□□□ -1.88
UBA52P62987 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.29□□□□□ -1.88
UBA52P62987 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.29□□□□□ -1.88
UBA52P62987 RPL23AP87-202ENST00000573039 466 ntBASIC3.29□□□□□ -1.88
UBA52P62987 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.29□□□□□ -1.88
UBA52P62987 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.29□□□□□ -1.88
UBA52P62987 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.29□□□□□ -1.88
UBA52P62987 AC090246.1-201ENST00000616499 426 ntBASIC3.29□□□□□ -1.88
UBA52P62987 AC092628.2-201ENST00000622492 339 ntBASIC3.29□□□□□ -1.88
UBA52P62987 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.29□□□□□ -1.88
UBA52P62987 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms