Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC3.7□□□□□ -1.82
LMO4P61968 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LMO4P61968 CYCSP29-201ENST00000533731 318 ntBASIC3.7□□□□□ -1.82
LMO4P61968 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.7□□□□□ -1.82
LMO4P61968 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.7□□□□□ -1.82
LMO4P61968 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.7□□□□□ -1.82
LMO4P61968 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.7□□□□□ -1.82
LMO4P61968 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.7□□□□□ -1.82
LMO4P61968 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.7□□□□□ -1.82
LMO4P61968 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC3.7□□□□□ -1.82
LMO4P61968 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.7□□□□□ -1.82
LMO4P61968 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.7□□□□□ -1.82
LMO4P61968 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC3.7□□□□□ -1.82
LMO4P61968 RN7SL622P-201ENST00000585292 275 ntBASIC3.7□□□□□ -1.82
LMO4P61968 AC011477.5-201ENST00000586571 259 ntBASIC3.7□□□□□ -1.82
LMO4P61968 NBR2-204ENST00000587322 63 ntBASIC3.7□□□□□ -1.82
LMO4P61968 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.7□□□□□ -1.82
LMO4P61968 ARF4P1-201ENST00000605447 541 ntBASIC3.7□□□□□ -1.82
LMO4P61968 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.7□□□□□ -1.82
LMO4P61968 AC243654.2-201ENST00000612843 443 ntBASIC3.7□□□□□ -1.82
LMO4P61968 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.7□□□□□ -1.82
LMO4P61968 MIR6891-201ENST00000618788 93 ntBASIC3.7□□□□□ -1.82
LMO4P61968 AL445567.2-201ENST00000618935 498 ntBASIC3.7□□□□□ -1.82
LMO4P61968 AL121895.2-201ENST00000619558 447 ntBASIC3.7□□□□□ -1.82
LMO4P61968 AC131159.1-201ENST00000621854 213 ntBASIC3.7□□□□□ -1.82
LMO4P61968 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.7□□□□□ -1.82
LMO4P61968 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.7□□□□□ -1.82
LMO4P61968 EIF2AP4-201ENST00000424793 1781 ntBASIC3.7□□□□□ -1.82
LMO4P61968 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LMO4P61968 AC005005.4-201ENST00000623789 16698 ntBASIC3.7□□□□□ -1.82
LMO4P61968 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LMO4P61968 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LMO4P61968 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
LMO4P61968 AL118496.1-201ENST00000440201 1812 ntBASIC3.7□□□□□ -1.82
LMO4P61968 AC090971.4-201ENST00000560291 1800 ntBASIC3.7□□□□□ -1.82
LMO4P61968 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LMO4P61968 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.7□□□□□ -1.82
LMO4P61968 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.7□□□□□ -1.82
LMO4P61968 MTND4P31-201ENST00000425607 1343 ntBASIC3.7□□□□□ -1.82
LMO4P61968 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LMO4P61968 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
LMO4P61968 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LMO4P61968 OR51H2P-202ENST00000641424 3046 ntBASIC3.69□□□□□ -1.82
LMO4P61968 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
LMO4P61968 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LMO4P61968 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
LMO4P61968 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LMO4P61968 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC3.69□□□□□ -1.82
LMO4P61968 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LMO4P61968 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.69□□□□□ -1.82
LMO4P61968 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.69□□□□□ -1.82
LMO4P61968 MTND4P4-201ENST00000439033 1366 ntBASIC3.69□□□□□ -1.82
LMO4P61968 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
LMO4P61968 BTBD10P1-201ENST00000549824 1352 ntBASIC3.69□□□□□ -1.82
LMO4P61968 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
LMO4P61968 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
LMO4P61968 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
LMO4P61968 AC011155.1-201ENST00000316512 456 ntBASIC3.69□□□□□ -1.82
LMO4P61968 RN7SKP224-201ENST00000364140 325 ntBASIC3.69□□□□□ -1.82
LMO4P61968 RNA5SP366-201ENST00000365454 123 ntBASIC3.69□□□□□ -1.82
LMO4P61968 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.69□□□□□ -1.82
LMO4P61968 Y_RNA.472-201ENST00000384322 102 ntBASIC3.69□□□□□ -1.82
LMO4P61968 SNORD116-12-201ENST00000384468 92 ntBASIC3.69□□□□□ -1.82
LMO4P61968 SNORD116-4-201ENST00000384733 96 ntBASIC3.69□□□□□ -1.82
LMO4P61968 AL592291.1-201ENST00000403830 352 ntBASIC3.69□□□□□ -1.82
LMO4P61968 AL138880.1-201ENST00000405824 642 ntBASIC3.69□□□□□ -1.82
LMO4P61968 AL356131.1-201ENST00000405826 414 ntBASIC3.69□□□□□ -1.82
LMO4P61968 SNORA11F-201ENST00000408237 128 ntBASIC3.69□□□□□ -1.82
LMO4P61968 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.69□□□□□ -1.82
LMO4P61968 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.69□□□□□ -1.82
LMO4P61968 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.69□□□□□ -1.82
LMO4P61968 SEPT2P1-201ENST00000419651 180 ntBASIC3.69□□□□□ -1.82
LMO4P61968 PNRC2P1-201ENST00000423940 420 ntBASIC3.69□□□□□ -1.82
LMO4P61968 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.69□□□□□ -1.82
LMO4P61968 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.69□□□□□ -1.82
LMO4P61968 RPS3AP54-201ENST00000435535 734 ntBASIC3.69□□□□□ -1.82
LMO4P61968 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.69□□□□□ -1.82
LMO4P61968 MUPP-201ENST00000438111 566 ntBASIC3.69□□□□□ -1.82
LMO4P61968 AL008629.1-201ENST00000438615 184 ntBASIC3.69□□□□□ -1.82
LMO4P61968 AL450263.2-201ENST00000439400 589 ntBASIC3.69□□□□□ -1.82
LMO4P61968 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LMO4P61968 AL589880.1-201ENST00000448271 287 ntBASIC3.69□□□□□ -1.82
LMO4P61968 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.69□□□□□ -1.82
LMO4P61968 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.69□□□□□ -1.82
LMO4P61968 AC239809.1-201ENST00000450470 217 ntBASIC3.69□□□□□ -1.82
LMO4P61968 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC3.69□□□□□ -1.82
LMO4P61968 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.69□□□□□ -1.82
LMO4P61968 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.69□□□□□ -1.82
LMO4P61968 RPS27AP17-201ENST00000463344 455 ntBASIC3.69□□□□□ -1.82
LMO4P61968 RPS4XP6-201ENST00000477670 797 ntBASIC3.69□□□□□ -1.82
LMO4P61968 MTND6P6-201ENST00000478031 263 ntBASIC3.69□□□□□ -1.82
LMO4P61968 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC3.69□□□□□ -1.82
LMO4P61968 MTND2P14-201ENST00000482139 351 ntBASIC3.69□□□□□ -1.82
LMO4P61968 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.69□□□□□ -1.82
LMO4P61968 AC010285.3-201ENST00000511668 676 ntBASIC3.69□□□□□ -1.82
LMO4P61968 OR5BM1P-201ENST00000512021 366 ntBASIC3.69□□□□□ -1.82
LMO4P61968 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.69□□□□□ -1.82
LMO4P61968 RNA5SP303-201ENST00000516192 130 ntBASIC3.69□□□□□ -1.82
LMO4P61968 NPM1P6-201ENST00000521088 871 ntBASIC3.69□□□□□ -1.82
LMO4P61968 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms