Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.77□□□□□ -1.65
HDAC4P56524 AC234771.5-201ENST00000600161 514 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.77□□□□□ -1.65
HDAC4P56524 RPL26P30-202ENST00000602923 645 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 BNIP3P4-201ENST00000604946 565 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.77□□□□□ -1.65
HDAC4P56524 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.77□□□□□ -1.65
HDAC4P56524 AL121895.2-201ENST00000619558 447 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 RMST_9.1-201ENST00000619945 193 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HDAC4P56524 MIR7703-201ENST00000620784 77 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 AP003072.4-201ENST00000624580 310 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 AL356121.2-201ENST00000624715 780 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.77□□□□□ -1.65
HDAC4P56524 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.77□□□□□ -1.65
HDAC4P56524 ATE1-AS1-202ENST00000636460 506 ntBASIC4.77□□□□□ -1.65
HDAC4P56524 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.77□□□□□ -1.65
HDAC4P56524 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HDAC4P56524 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HDAC4P56524 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
HDAC4P56524 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HDAC4P56524 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HDAC4P56524 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
HDAC4P56524 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.77□□□□□ -1.65
HDAC4P56524 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HDAC4P56524 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDAC4P56524 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.76□□□□□ -1.65
HDAC4P56524 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDAC4P56524 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
HDAC4P56524 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HDAC4P56524 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HDAC4P56524 SNORA71.2-201ENST00000364941 134 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 RNA5SP151-201ENST00000365632 117 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 MIR659-201ENST00000384963 97 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 RNU6-1242P-201ENST00000391052 103 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
HDAC4P56524 SNORA11C-201ENST00000408532 129 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.76□□□□□ -1.65
HDAC4P56524 AC027644.1-201ENST00000419595 298 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.76□□□□□ -1.65
HDAC4P56524 OR5AW1P-201ENST00000426334 1006 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.76□□□□□ -1.65
HDAC4P56524 RPL21P91-201ENST00000429231 479 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.76□□□□□ -1.65
HDAC4P56524 USP9YP24-201ENST00000434374 697 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 USP9YP17-201ENST00000444617 696 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 AC005002.1-201ENST00000447458 540 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 RPL23AP71-201ENST00000470966 469 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
HDAC4P56524 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.76□□□□□ -1.65
HDAC4P56524 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HDAC4P56524 RPS6P4-201ENST00000494693 758 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 AL035404.1-201ENST00000497982 568 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 AC091860.1-201ENST00000505723 432 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.76□□□□□ -1.65
HDAC4P56524 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.76□□□□□ -1.65
HDAC4P56524 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.76□□□□□ -1.65
HDAC4P56524 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.76□□□□□ -1.65
HDAC4P56524 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HDAC4P56524 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.76□□□□□ -1.65
HDAC4P56524 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDAC4P56524 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.76□□□□□ -1.65
HDAC4P56524 AC084757.1-201ENST00000559987 490 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.76□□□□□ -1.65
HDAC4P56524 MTCO1P40-201ENST00000574371 625 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.76□□□□□ -1.65
HDAC4P56524 AC090312.2-201ENST00000582687 378 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.76□□□□□ -1.65
HDAC4P56524 AL133338.2-201ENST00000604292 736 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDAC4P56524 AL161616.1-201ENST00000611867 286 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDAC4P56524 AC108467.2-201ENST00000617640 1597 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 AC005086.4-201ENST00000623065 213 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 AC092608.3-201ENST00000625017 386 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 CDRT1-208ENST00000630868 794 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 MIR6715B-201ENST00000637172 77 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 AC017104.5-201ENST00000637647 639 ntBASIC4.76□□□□□ -1.65
HDAC4P56524 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HDAC4P56524 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDAC4P56524 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDAC4P56524 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.76□□□□□ -1.65
HDAC4P56524 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDAC4P56524 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HDAC4P56524 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HDAC4P56524 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.76□□□□□ -1.65
HDAC4P56524 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.75□□□□□ -1.65
HDAC4P56524 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HDAC4P56524 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HDAC4P56524 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.75□□□□□ -1.65
HDAC4P56524 OR11H5P-202ENST00000641612 1325 ntBASIC4.75□□□□□ -1.65
HDAC4P56524 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
HDAC4P56524 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HDAC4P56524 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HDAC4P56524 AC125257.1-201ENST00000560400 2930 ntBASIC4.75□□□□□ -1.65
HDAC4P56524 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HDAC4P56524 RNA5SP513-201ENST00000364648 118 ntBASIC4.75□□□□□ -1.65
HDAC4P56524 Y_RNA.472-201ENST00000384322 102 ntBASIC4.75□□□□□ -1.65
HDAC4P56524 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HDAC4P56524 AL590139.1-201ENST00000416267 400 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms