Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.84□□□□□ -1.79
PKNOX1P55347 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PKNOX1P55347 CYCSP29-201ENST00000533731 318 ntBASIC3.84□□□□□ -1.79
PKNOX1P55347 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.84□□□□□ -1.79
PKNOX1P55347 AC092851.1-201ENST00000535964 478 ntBASIC3.84□□□□□ -1.79
PKNOX1P55347 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.84□□□□□ -1.79
PKNOX1P55347 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.84□□□□□ -1.79
PKNOX1P55347 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PKNOX1P55347 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.84□□□□□ -1.79
PKNOX1P55347 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.84□□□□□ -1.79
PKNOX1P55347 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.84□□□□□ -1.79
PKNOX1P55347 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.84□□□□□ -1.79
PKNOX1P55347 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
PKNOX1P55347 AC110741.2-201ENST00000605278 268 ntBASIC3.84□□□□□ -1.79
PKNOX1P55347 MIR6868-201ENST00000611215 58 ntBASIC3.84□□□□□ -1.79
PKNOX1P55347 CFTRP2-201ENST00000634304 199 ntBASIC3.84□□□□□ -1.79
PKNOX1P55347 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.84□□□□□ -1.79
PKNOX1P55347 AC009452.1-201ENST00000640823 606 ntBASIC3.84□□□□□ -1.79
PKNOX1P55347 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
PKNOX1P55347 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.84□□□□□ -1.8
PKNOX1P55347 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
PKNOX1P55347 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PKNOX1P55347 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.83□□□□□ -1.8
PKNOX1P55347 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PKNOX1P55347 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.83□□□□□ -1.8
PKNOX1P55347 RNA5SP399-201ENST00000364003 117 ntBASIC3.83□□□□□ -1.8
PKNOX1P55347 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PKNOX1P55347 RPL37P18-201ENST00000411602 243 ntBASIC3.83□□□□□ -1.8
PKNOX1P55347 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.83□□□□□ -1.8
PKNOX1P55347 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.83□□□□□ -1.8
PKNOX1P55347 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.83□□□□□ -1.8
PKNOX1P55347 AC092809.1-201ENST00000441469 474 ntBASIC3.83□□□□□ -1.8
PKNOX1P55347 SNRPGP5-201ENST00000456003 220 ntBASIC3.83□□□□□ -1.8
PKNOX1P55347 AC105137.1-201ENST00000484355 562 ntBASIC3.83□□□□□ -1.8
PKNOX1P55347 AL132838.2-201ENST00000492041 314 ntBASIC3.83□□□□□ -1.8
PKNOX1P55347 AC106806.2-201ENST00000509365 500 ntBASIC3.83□□□□□ -1.8
PKNOX1P55347 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.83□□□□□ -1.8
PKNOX1P55347 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.83□□□□□ -1.8
PKNOX1P55347 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.83□□□□□ -1.8
PKNOX1P55347 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.83□□□□□ -1.8
PKNOX1P55347 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.83□□□□□ -1.8
PKNOX1P55347 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.83□□□□□ -1.8
PKNOX1P55347 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.83□□□□□ -1.8
PKNOX1P55347 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.83□□□□□ -1.8
PKNOX1P55347 AC009643.1-201ENST00000532030 391 ntBASIC3.83□□□□□ -1.8
PKNOX1P55347 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PKNOX1P55347 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.83□□□□□ -1.8
PKNOX1P55347 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.83□□□□□ -1.8
PKNOX1P55347 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.83□□□□□ -1.8
PKNOX1P55347 AC068790.4-201ENST00000602474 263 ntBASIC3.83□□□□□ -1.8
PKNOX1P55347 AC040174.2-201ENST00000602701 465 ntBASIC3.83□□□□□ -1.8
PKNOX1P55347 AL355816.1-201ENST00000607951 118 ntBASIC3.83□□□□□ -1.8
PKNOX1P55347 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.83□□□□□ -1.8
PKNOX1P55347 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.83□□□□□ -1.8
PKNOX1P55347 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.83□□□□□ -1.8
PKNOX1P55347 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PKNOX1P55347 MTND4P21-201ENST00000453886 1357 ntBASIC3.83□□□□□ -1.8
PKNOX1P55347 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.83□□□□□ -1.8
PKNOX1P55347 RNF6P1-201ENST00000444889 1784 ntBASIC3.83□□□□□ -1.8
PKNOX1P55347 SAGE2P-201ENST00000420011 2126 ntBASIC3.83□□□□□ -1.8
PKNOX1P55347 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PKNOX1P55347 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PKNOX1P55347 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PKNOX1P55347 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PKNOX1P55347 HSPA8P1-201ENST00000425843 1833 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PKNOX1P55347 GTF2H2B-203ENST00000508065 1432 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PKNOX1P55347 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
PKNOX1P55347 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PKNOX1P55347 MIR423-201ENST00000362201 94 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.82□□□□□ -1.8
PKNOX1P55347 RNU6-317P-201ENST00000384031 107 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 HLFP1-201ENST00000402375 499 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.82□□□□□ -1.8
PKNOX1P55347 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.82□□□□□ -1.8
PKNOX1P55347 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.82□□□□□ -1.8
PKNOX1P55347 LINC01881-201ENST00000416103 412 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 MTCO3P4-201ENST00000419236 787 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 FAM204CP-201ENST00000424489 642 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 MORF4L1P7-201ENST00000426038 703 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.82□□□□□ -1.8
PKNOX1P55347 MRPL50P1-201ENST00000431951 384 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 RPS26P40-201ENST00000435209 294 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.82□□□□□ -1.8
PKNOX1P55347 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.82□□□□□ -1.8
PKNOX1P55347 RPS17P13-201ENST00000448974 407 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.82□□□□□ -1.8
PKNOX1P55347 MTND2P8-201ENST00000450555 1025 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 MTND2P6-201ENST00000455337 1030 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.82□□□□□ -1.8
PKNOX1P55347 AC006511.1-201ENST00000470614 315 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 AC068305.1-201ENST00000497406 726 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 SNORA31.13-201ENST00000516624 135 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.82□□□□□ -1.8
PKNOX1P55347 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.82□□□□□ -1.8
PKNOX1P55347 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.82□□□□□ -1.8
PKNOX1P55347 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.82□□□□□ -1.8
PKNOX1P55347 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms