Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.76□□□□□ -1.81
CXCL12P48061 HMGB3P13-201ENST00000511263 607 ntBASIC3.76□□□□□ -1.81
CXCL12P48061 AC119751.5-201ENST00000514077 770 ntBASIC3.76□□□□□ -1.81
CXCL12P48061 IGKV2-38-201ENST00000517443 247 ntBASIC3.76□□□□□ -1.81
CXCL12P48061 AC103843.2-201ENST00000530523 682 ntBASIC3.76□□□□□ -1.81
CXCL12P48061 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CXCL12P48061 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.76□□□□□ -1.81
CXCL12P48061 AC117490.2-201ENST00000610042 594 ntBASIC3.76□□□□□ -1.81
CXCL12P48061 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CXCL12P48061 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.76□□□□□ -1.81
CXCL12P48061 ZNF962P-201ENST00000443465 3140 ntBASIC3.76□□□□□ -1.81
CXCL12P48061 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CXCL12P48061 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.76□□□□□ -1.81
CXCL12P48061 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CXCL12P48061 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CXCL12P48061 AC090337.1-201ENST00000579651 2074 ntBASIC3.75□□□□□ -1.81
CXCL12P48061 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.75□□□□□ -1.81
CXCL12P48061 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CXCL12P48061 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CXCL12P48061 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CXCL12P48061 RNU6-697P-201ENST00000363348 107 ntBASIC3.75□□□□□ -1.81
CXCL12P48061 SNORA38.1-201ENST00000364172 131 ntBASIC3.75□□□□□ -1.81
CXCL12P48061 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CXCL12P48061 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.75□□□□□ -1.81
CXCL12P48061 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CXCL12P48061 TPTE2P1-204ENST00000435256 593 ntBASIC3.75□□□□□ -1.81
CXCL12P48061 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.75□□□□□ -1.81
CXCL12P48061 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CXCL12P48061 MTND6P32-201ENST00000457611 483 ntBASIC3.75□□□□□ -1.81
CXCL12P48061 AP000563.1-201ENST00000490865 758 ntBASIC3.75□□□□□ -1.81
CXCL12P48061 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.75□□□□□ -1.81
CXCL12P48061 MTCYBP19-201ENST00000517463 1124 ntBASIC3.75□□□□□ -1.81
CXCL12P48061 HMGB3P26-201ENST00000560051 582 ntBASIC3.75□□□□□ -1.81
CXCL12P48061 CD24P2-201ENST00000565486 219 ntBASIC3.75□□□□□ -1.81
CXCL12P48061 MIMT1-201ENST00000597105 1050 ntBASIC3.75□□□□□ -1.81
CXCL12P48061 AC079880.2-201ENST00000603790 1213 ntBASIC3.75□□□□□ -1.81
CXCL12P48061 SNORA62.6-201ENST00000606322 83 ntBASIC3.75□□□□□ -1.81
CXCL12P48061 AL031666.3-201ENST00000609320 1006 ntBASIC3.75□□□□□ -1.81
CXCL12P48061 MIR7851-201ENST00000610611 160 ntBASIC3.75□□□□□ -1.81
CXCL12P48061 AC079298.2-201ENST00000623885 459 ntBASIC3.75□□□□□ -1.81
CXCL12P48061 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CXCL12P48061 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CXCL12P48061 ZNF833P-201ENST00000424938 1494 ntBASIC3.74□□□□□ -1.81
CXCL12P48061 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.74□□□□□ -1.81
CXCL12P48061 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.74□□□□□ -1.81
CXCL12P48061 AC093908.1-201ENST00000623125 8092 ntBASIC3.74□□□□□ -1.81
CXCL12P48061 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CXCL12P48061 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CXCL12P48061 SNORD9-201ENST00000362566 104 ntBASIC3.74□□□□□ -1.81
CXCL12P48061 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.74□□□□□ -1.81
CXCL12P48061 HSPD1P16-201ENST00000402302 394 ntBASIC3.74□□□□□ -1.81
CXCL12P48061 AL121834.1-202ENST00000404494 277 ntBASIC3.74□□□□□ -1.81
CXCL12P48061 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.74□□□□□ -1.81
CXCL12P48061 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.74□□□□□ -1.81
CXCL12P48061 AC007529.1-201ENST00000418574 2178 ntBASIC3.74□□□□□ -1.81
CXCL12P48061 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.74□□□□□ -1.81
CXCL12P48061 AC004448.2-201ENST00000422360 586 ntBASIC3.74□□□□□ -1.81
CXCL12P48061 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.74□□□□□ -1.81
CXCL12P48061 AL136126.1-201ENST00000473603 402 ntBASIC3.74□□□□□ -1.81
CXCL12P48061 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
CXCL12P48061 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.74□□□□□ -1.81
CXCL12P48061 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.74□□□□□ -1.81
CXCL12P48061 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.74□□□□□ -1.81
CXCL12P48061 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.74□□□□□ -1.81
CXCL12P48061 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.74□□□□□ -1.81
CXCL12P48061 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.74□□□□□ -1.81
CXCL12P48061 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.74□□□□□ -1.81
CXCL12P48061 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.74□□□□□ -1.81
CXCL12P48061 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.74□□□□□ -1.81
CXCL12P48061 GMCL1P2-201ENST00000605230 823 ntBASIC3.74□□□□□ -1.81
CXCL12P48061 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.74□□□□□ -1.81
CXCL12P48061 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.74□□□□□ -1.81
CXCL12P48061 AL773545.4-201ENST00000637262 310 ntBASIC3.74□□□□□ -1.81
CXCL12P48061 AL513478.4-201ENST00000641636 310 ntBASIC3.74□□□□□ -1.81
CXCL12P48061 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
CXCL12P48061 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CXCL12P48061 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
CXCL12P48061 AC105074.1-201ENST00000623380 3095 ntBASIC3.74□□□□□ -1.81
CXCL12P48061 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CXCL12P48061 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CXCL12P48061 AC126323.6-202ENST00000568092 3511 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 AC018529.3-201ENST00000624212 2254 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.73□□□□□ -1.81
CXCL12P48061 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CXCL12P48061 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.73□□□□□ -1.81
CXCL12P48061 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
CXCL12P48061 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CXCL12P48061 RNU1-33P-201ENST00000364249 162 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.73□□□□□ -1.81
CXCL12P48061 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CXCL12P48061 MIR128-1-201ENST00000384921 82 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 AJ239321.1-201ENST00000424255 564 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 AC106901.1-201ENST00000425086 698 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 AC069285.2-201ENST00000440210 275 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 ARL4AP3-201ENST00000441452 574 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 VN1R25P-201ENST00000443385 738 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.73□□□□□ -1.81
CXCL12P48061 AL162388.1-201ENST00000450912 352 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 VN1R40P-201ENST00000455196 941 ntBASIC3.73□□□□□ -1.81
CXCL12P48061 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms