Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.61□□□□□ -1.51
CLIP1P30622 AC067852.3-201ENST00000589177 561 ntBASIC5.61□□□□□ -1.51
CLIP1P30622 AC103858.2-201ENST00000621471 543 ntBASIC5.61□□□□□ -1.51
CLIP1P30622 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC5.61□□□□□ -1.51
CLIP1P30622 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP1P30622 CDY3P-201ENST00000454543 1618 ntBASIC5.61□□□□□ -1.51
CLIP1P30622 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP1P30622 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP1P30622 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
CLIP1P30622 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC5.61□□□□□ -1.51
CLIP1P30622 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP1P30622 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP1P30622 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC5.6□□□□□ -1.51
CLIP1P30622 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP1P30622 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
CLIP1P30622 RPS26P47-201ENST00000427219 348 ntBASIC5.6□□□□□ -1.51
CLIP1P30622 AC005300.1-201ENST00000428401 373 ntBASIC5.6□□□□□ -1.51
CLIP1P30622 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.6□□□□□ -1.51
CLIP1P30622 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.6□□□□□ -1.51
CLIP1P30622 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.6□□□□□ -1.51
CLIP1P30622 RPL26P28-201ENST00000451325 435 ntBASIC5.6□□□□□ -1.51
CLIP1P30622 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.6□□□□□ -1.51
CLIP1P30622 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.6□□□□□ -1.51
CLIP1P30622 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP1P30622 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.6□□□□□ -1.51
CLIP1P30622 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.6□□□□□ -1.51
CLIP1P30622 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.6□□□□□ -1.51
CLIP1P30622 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP1P30622 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.6□□□□□ -1.51
CLIP1P30622 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP1P30622 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP1P30622 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.6□□□□□ -1.51
CLIP1P30622 MIR634-201ENST00000385208 97 ntBASIC5.59□□□□□ -1.51
CLIP1P30622 AC074367.1-201ENST00000438685 1125 ntBASIC5.59□□□□□ -1.51
CLIP1P30622 AC104849.1-201ENST00000462623 405 ntBASIC5.59□□□□□ -1.51
CLIP1P30622 AC017015.1-201ENST00000477387 286 ntBASIC5.59□□□□□ -1.51
CLIP1P30622 SYT14P1-201ENST00000481459 721 ntBASIC5.59□□□□□ -1.51
CLIP1P30622 HMGB3P14-201ENST00000494195 599 ntBASIC5.59□□□□□ -1.51
CLIP1P30622 AC093663.1-201ENST00000497190 394 ntBASIC5.59□□□□□ -1.51
CLIP1P30622 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.59□□□□□ -1.51
CLIP1P30622 AC005476.1-201ENST00000554427 397 ntBASIC5.59□□□□□ -1.51
CLIP1P30622 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CLIP1P30622 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLIP1P30622 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.59□□□□□ -1.51
CLIP1P30622 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
CLIP1P30622 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC5.59□□□□□ -1.52
CLIP1P30622 AC073073.2-201ENST00000609827 2578 ntBASIC5.59□□□□□ -1.52
CLIP1P30622 RN7SKP111-201ENST00000410349 271 ntBASIC5.58□□□□□ -1.52
CLIP1P30622 RNA5SP120-201ENST00000410900 112 ntBASIC5.58□□□□□ -1.52
CLIP1P30622 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.58□□□□□ -1.52
CLIP1P30622 AC017083.1-201ENST00000428093 483 ntBASIC5.58□□□□□ -1.52
CLIP1P30622 AL035458.1-201ENST00000433096 585 ntBASIC5.58□□□□□ -1.52
CLIP1P30622 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.58□□□□□ -1.52
CLIP1P30622 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.58□□□□□ -1.52
CLIP1P30622 RPL21P10-201ENST00000463521 490 ntBASIC5.58□□□□□ -1.52
CLIP1P30622 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.58□□□□□ -1.52
CLIP1P30622 RPL21P13-201ENST00000488305 481 ntBASIC5.58□□□□□ -1.52
CLIP1P30622 OR5AP1P-201ENST00000529730 940 ntBASIC5.58□□□□□ -1.52
CLIP1P30622 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.58□□□□□ -1.52
CLIP1P30622 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.58□□□□□ -1.52
CLIP1P30622 MIR5186-201ENST00000577504 120 ntBASIC5.58□□□□□ -1.52
CLIP1P30622 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.58□□□□□ -1.52
CLIP1P30622 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.58□□□□□ -1.52
CLIP1P30622 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
CLIP1P30622 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLIP1P30622 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC5.58□□□□□ -1.52
CLIP1P30622 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLIP1P30622 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.58□□□□□ -1.52
CLIP1P30622 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLIP1P30622 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC5.58□□□□□ -1.52
CLIP1P30622 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLIP1P30622 SNORA11.2-201ENST00000408318 127 ntBASIC5.57□□□□□ -1.52
CLIP1P30622 ANP32BP2-201ENST00000454525 545 ntBASIC5.57□□□□□ -1.52
CLIP1P30622 DCLRE1CP1-201ENST00000454630 470 ntBASIC5.57□□□□□ -1.52
CLIP1P30622 RPL5P24-201ENST00000463742 885 ntBASIC5.57□□□□□ -1.52
CLIP1P30622 RN7SL807P-201ENST00000470923 297 ntBASIC5.57□□□□□ -1.52
CLIP1P30622 SETP6-201ENST00000479329 568 ntBASIC5.57□□□□□ -1.52
CLIP1P30622 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
CLIP1P30622 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.57□□□□□ -1.52
CLIP1P30622 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.57□□□□□ -1.52
CLIP1P30622 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLIP1P30622 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLIP1P30622 ZNF833P-201ENST00000424938 1494 ntBASIC5.57□□□□□ -1.52
CLIP1P30622 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLIP1P30622 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLIP1P30622 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CLIP1P30622 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CLIP1P30622 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CLIP1P30622 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CLIP1P30622 RNA5SP197-201ENST00000363357 119 ntBASIC5.57□□□□□ -1.52
CLIP1P30622 RNU1-89P-201ENST00000384592 164 ntBASIC5.57□□□□□ -1.52
CLIP1P30622 MTND4P22-201ENST00000413116 1169 ntBASIC5.57□□□□□ -1.52
CLIP1P30622 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.57□□□□□ -1.52
CLIP1P30622 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CLIP1P30622 RPS29P2-201ENST00000479278 136 ntBASIC5.57□□□□□ -1.52
CLIP1P30622 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.57□□□□□ -1.52
CLIP1P30622 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.57□□□□□ -1.52
CLIP1P30622 NCAPGP2-201ENST00000557911 754 ntBASIC5.57□□□□□ -1.52
CLIP1P30622 AC012493.2-201ENST00000595083 291 ntBASIC5.57□□□□□ -1.52
CLIP1P30622 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms