Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RN7SKP121-201ENST00000410842 305 ntBASIC6.71□□□□□ -1.34
VARSP26640 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC6.71□□□□□ -1.34
VARSP26640 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.71□□□□□ -1.34
VARSP26640 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.71□□□□□ -1.34
VARSP26640 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VARSP26640 MTND1P17-201ENST00000448961 204 ntBASIC6.71□□□□□ -1.34
VARSP26640 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.71□□□□□ -1.34
VARSP26640 AL049714.1-201ENST00000466686 347 ntBASIC6.71□□□□□ -1.34
VARSP26640 Y_RNA.654-201ENST00000497848 106 ntBASIC6.71□□□□□ -1.34
VARSP26640 HMGN1P9-201ENST00000515212 298 ntBASIC6.71□□□□□ -1.34
VARSP26640 AC138517.1-201ENST00000515724 568 ntBASIC6.71□□□□□ -1.34
VARSP26640 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.71□□□□□ -1.34
VARSP26640 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VARSP26640 AC109635.4-202ENST00000531666 412 ntBASIC6.71□□□□□ -1.34
VARSP26640 OR8R1P-201ENST00000543943 764 ntBASIC6.71□□□□□ -1.34
VARSP26640 AC026458.1-201ENST00000564330 438 ntBASIC6.71□□□□□ -1.34
VARSP26640 AC008687.2-201ENST00000597865 520 ntBASIC6.71□□□□□ -1.34
VARSP26640 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.71□□□□□ -1.34
VARSP26640 AC104662.1-201ENST00000604448 511 ntBASIC6.71□□□□□ -1.34
VARSP26640 AL591167.1-201ENST00000607321 456 ntBASIC6.71□□□□□ -1.34
VARSP26640 AL355810.1-201ENST00000614629 552 ntBASIC6.71□□□□□ -1.34
VARSP26640 AC131009.3-201ENST00000621809 287 ntBASIC6.71□□□□□ -1.34
VARSP26640 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC6.71□□□□□ -1.34
VARSP26640 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.71□□□□□ -1.34
VARSP26640 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
VARSP26640 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.71□□□□□ -1.34
VARSP26640 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VARSP26640 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
VARSP26640 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
VARSP26640 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
VARSP26640 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
VARSP26640 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.71□□□□□ -1.34
VARSP26640 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
VARSP26640 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.71□□□□□ -1.34
VARSP26640 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
VARSP26640 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
VARSP26640 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
VARSP26640 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
VARSP26640 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.7□□□□□ -1.34
VARSP26640 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.7□□□□□ -1.34
VARSP26640 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VARSP26640 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
VARSP26640 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
VARSP26640 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
VARSP26640 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VARSP26640 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC6.7□□□□□ -1.34
VARSP26640 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
VARSP26640 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
VARSP26640 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VARSP26640 AC005592.1-201ENST00000566527 1640 ntBASIC6.7□□□□□ -1.34
VARSP26640 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
VARSP26640 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
VARSP26640 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
VARSP26640 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VARSP26640 RNU6-874P-201ENST00000362390 105 ntBASIC6.7□□□□□ -1.34
VARSP26640 RN7SKP118-201ENST00000364331 330 ntBASIC6.7□□□□□ -1.34
VARSP26640 RNU6-33P-201ENST00000384793 107 ntBASIC6.7□□□□□ -1.34
VARSP26640 RNA5SP53-201ENST00000391299 120 ntBASIC6.7□□□□□ -1.34
VARSP26640 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VARSP26640 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VARSP26640 EIF5P1-201ENST00000400019 1231 ntBASIC6.7□□□□□ -1.34
VARSP26640 AL356421.1-201ENST00000403255 413 ntBASIC6.7□□□□□ -1.34
VARSP26640 AL136100.1-201ENST00000407696 330 ntBASIC6.7□□□□□ -1.34
VARSP26640 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.7□□□□□ -1.34
VARSP26640 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.7□□□□□ -1.34
VARSP26640 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.7□□□□□ -1.34
VARSP26640 RPS15AP30-201ENST00000420976 390 ntBASIC6.7□□□□□ -1.34
VARSP26640 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC6.7□□□□□ -1.34
VARSP26640 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.7□□□□□ -1.34
VARSP26640 AC018804.1-201ENST00000430381 618 ntBASIC6.7□□□□□ -1.34
VARSP26640 MTATP6P16-201ENST00000434543 526 ntBASIC6.7□□□□□ -1.34
VARSP26640 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.7□□□□□ -1.34
VARSP26640 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC6.7□□□□□ -1.34
VARSP26640 MTCO3P45-201ENST00000443036 613 ntBASIC6.7□□□□□ -1.34
VARSP26640 AC020550.1-201ENST00000447385 163 ntBASIC6.7□□□□□ -1.34
VARSP26640 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VARSP26640 RBMY2TP-201ENST00000451162 947 ntBASIC6.7□□□□□ -1.34
VARSP26640 RPL31P11-202ENST00000454082 372 ntBASIC6.7□□□□□ -1.34
VARSP26640 RN7SL790P-201ENST00000474043 298 ntBASIC6.7□□□□□ -1.34
VARSP26640 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC6.7□□□□□ -1.34
VARSP26640 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.7□□□□□ -1.34
VARSP26640 MINOS1P4-201ENST00000515470 318 ntBASIC6.7□□□□□ -1.34
VARSP26640 RNU6-408P-201ENST00000515910 100 ntBASIC6.7□□□□□ -1.34
VARSP26640 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VARSP26640 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VARSP26640 AC090136.1-201ENST00000520009 240 ntBASIC6.7□□□□□ -1.34
VARSP26640 IGLVV-66-201ENST00000523818 341 ntBASIC6.7□□□□□ -1.34
VARSP26640 MTND4P7-201ENST00000523876 130 ntBASIC6.7□□□□□ -1.34
VARSP26640 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.7□□□□□ -1.34
VARSP26640 MDM2-233ENST00000545204 398 ntTSL 5 BASIC6.7□□□□□ -1.34
VARSP26640 AC068993.1-201ENST00000546724 589 ntBASIC6.7□□□□□ -1.34
VARSP26640 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC6.7□□□□□ -1.34
VARSP26640 MIR4775-201ENST00000581168 75 ntBASIC6.7□□□□□ -1.34
VARSP26640 AC017100.2-201ENST00000584628 355 ntBASIC6.7□□□□□ -1.34
VARSP26640 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC6.7□□□□□ -1.34
VARSP26640 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.7□□□□□ -1.34
VARSP26640 AP005212.3-201ENST00000619964 528 ntBASIC6.7□□□□□ -1.34
VARSP26640 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.7□□□□□ -1.34
VARSP26640 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.7□□□□□ -1.34
VARSP26640 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms