| PTPN2 | P17706 | ZRANB3-201 | ENST00000264159 | 4046 nt | APPRIS P3 TSL 1 (best) BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | SEPT7P7-201 | ENST00000420492 | 1301 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | PARP15-206 | ENST00000493645 | 1311 nt | TSL 1 (best) BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | SLCO1A2-201 | ENST00000307378 | 7682 nt | APPRIS P1 TSL 1 (best) BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC092650.1-201 | ENST00000447571 | 1808 nt | TSL 1 (best) BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | ACTR3BP5-201 | ENST00000448440 | 1479 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | INPP4B-201 | ENST00000262992 | 3741 nt | APPRIS P1 TSL 5 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AL391684.1-202 | ENST00000641293 | 1636 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AL590399.5-201 | ENST00000428709 | 3325 nt | TSL 2 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | TAS2R3-201 | ENST00000247879 | 1101 nt | APPRIS P1 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | MT-CO3-201 | ENST00000362079 | 784 nt | APPRIS P1 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | RNU6-549P-201 | ENST00000384433 | 107 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | EFCAB14-AS1-201 | ENST00000418985 | 491 nt | TSL 3 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | EIF4HP2-201 | ENST00000424380 | 563 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AL162725.2-201 | ENST00000430545 | 748 nt | TSL 5 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC105940.1-201 | ENST00000434265 | 353 nt | TSL 3 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | DIAPH3-AS1-203 | ENST00000435636 | 467 nt | TSL 2 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC009263.1-201 | ENST00000441193 | 1239 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | MTCYBP42-201 | ENST00000444653 | 1130 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AL591719.1-201 | ENST00000444669 | 744 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | NUTF2P3-201 | ENST00000448540 | 384 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AL160408.1-203 | ENST00000453568 | 631 nt | TSL 5 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | SNORD11.1-201 | ENST00000459482 | 85 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC004884.2-201 | ENST00000476569 | 546 nt | TSL 4 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AL035404.1-201 | ENST00000497982 | 568 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC008780.2-201 | ENST00000509844 | 820 nt | TSL 2 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | LINC00977-201 | ENST00000509893 | 1163 nt | TSL 2 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC097535.1-201 | ENST00000515263 | 332 nt | TSL 3 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | LINC01216-201 | ENST00000515728 | 824 nt | TSL 5 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | RNA5SP249-201 | ENST00000516127 | 99 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC016885.1-201 | ENST00000517796 | 532 nt | TSL 4 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC023202.1-201 | ENST00000521681 | 491 nt | TSL 3 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC087379.1-201 | ENST00000524613 | 993 nt | TSL 5 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AL133372.3-201 | ENST00000553082 | 821 nt | TSL 3 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC016526.2-201 | ENST00000554225 | 520 nt | TSL 3 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | LINC02170-201 | ENST00000561519 | 555 nt | TSL 4 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | APOOP5-203 | ENST00000565921 | 410 nt | TSL 3 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC091588.1-201 | ENST00000578504 | 359 nt | TSL 3 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC069366.1-201 | ENST00000583159 | 838 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC118757.1-201 | ENST00000586982 | 453 nt | TSL 2 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | PSMD5-AS1-203 | ENST00000589026 | 525 nt | TSL 5 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | EIF1P6-201 | ENST00000600054 | 334 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AL353811.1-201 | ENST00000602851 | 736 nt | TSL 5 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AL583856.2-201 | ENST00000606298 | 543 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC097505.1-201 | ENST00000610199 | 565 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC023043.4-201 | ENST00000612081 | 449 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC079395.3-201 | ENST00000615161 | 484 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC010975.3-201 | ENST00000618727 | 978 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AP000843.1-201 | ENST00000624880 | 701 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | ATE1-AS1-202 | ENST00000636460 | 506 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | COA1-220 | ENST00000640232 | 192 nt | APPRIS ALT2 TSL 3 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | ZNF660-201 | ENST00000322734 | 5834 nt | APPRIS P1 TSL 2 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | NUDCD1-202 | ENST00000427660 | 2098 nt | TSL 1 (best) BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | WDR72-202 | ENST00000396328 | 7507 nt | APPRIS P2 TSL 1 (best) BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC025034.1-201 | ENST00000552778 | 1711 nt | TSL 3 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | NRK-204 | ENST00000540278 | 1687 nt | TSL 2 BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | NEAT1-202 | ENST00000501122 | 22743 nt | BASIC | 4.77 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | OR6K3-201 | ENST00000368145 | 1844 nt | APPRIS P1 BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | PTPRD-201 | ENST00000355233 | 8251 nt | TSL 1 (best) BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | C1orf141-208 | ENST00000621590 | 4179 nt | APPRIS ALT2 TSL 5 BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC104446.1-201 | ENST00000613728 | 1321 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | LRRC77P-206 | ENST00000481578 | 2350 nt | TSL 1 (best) BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | ZNF560-201 | ENST00000301480 | 2654 nt | APPRIS P1 TSL 1 (best) BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | PCDH11X-207 | ENST00000406881 | 4156 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | WFDC9-201 | ENST00000326000 | 659 nt | APPRIS P1 TSL 1 (best) BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | OR4F6-201 | ENST00000328882 | 1238 nt | APPRIS P1 BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | CARD16-202 | ENST00000375706 | 686 nt | APPRIS P1 TSL 1 (best) BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | SLC8A1-AS1-201 | ENST00000413479 | 800 nt | TSL 5 BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | HIGD1AP15-201 | ENST00000416198 | 280 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AL391839.1-201 | ENST00000417447 | 265 nt | TSL 2 BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC114814.2-201 | ENST00000419195 | 485 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AL390774.2-201 | ENST00000423942 | 788 nt | TSL 3 BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AL353801.1-201 | ENST00000425541 | 425 nt | TSL 3 BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AL357833.2-201 | ENST00000426811 | 430 nt | TSL 3 BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | HIGD1AP12-201 | ENST00000427832 | 281 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | RPS27AP12-201 | ENST00000429552 | 465 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | LINC01850-201 | ENST00000429916 | 357 nt | TSL 3 BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AP000146.1-202 | ENST00000441666 | 441 nt | TSL 3 BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | PHBP16-201 | ENST00000446318 | 950 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AL137802.1-201 | ENST00000452795 | 327 nt | TSL 5 BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | NAALADL2-AS3-202 | ENST00000453180 | 413 nt | TSL 3 BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | HPRT1P2-201 | ENST00000505250 | 544 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC093903.1-201 | ENST00000507220 | 405 nt | TSL 3 BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | SNORD116-26-201 | ENST00000516006 | 96 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | SNORA31.9-201 | ENST00000516429 | 84 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | snoZ278.1-201 | ENST00000517059 | 112 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | LRRC34P1-201 | ENST00000542742 | 915 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC073487.1-201 | ENST00000547009 | 529 nt | TSL 4 BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | GLIPR1L1-204 | ENST00000548623 | 484 nt | TSL 3 BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | PSMB7P1-201 | ENST00000556349 | 514 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | HMGB3P26-201 | ENST00000560051 | 582 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC012146.1-201 | ENST00000571138 | 462 nt | TSL 2 BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AP005230.1-201 | ENST00000585072 | 675 nt | TSL 5 BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | DYNAP-202 | ENST00000585973 | 1102 nt | APPRIS ALT2 TSL 3 BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AL157938.2-204 | ENST00000589667 | 826 nt | TSL 5 BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AP001542.2-201 | ENST00000593141 | 364 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | IPO5P1-202 | ENST00000600039 | 287 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | PDZPH1P-202 | ENST00000602846 | 722 nt | TSL 3 BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | ARF4P1-201 | ENST00000605447 | 541 nt | BASIC | 4.76 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC009237.15-201 | ENST00000610252 | 501 nt | BASIC | 4.76 | □□□□□ -1.65 | | |