Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC006989.1-201ENST00000427212 131 ntBASIC3.64□□□□□ -1.83
HLA-DQB2P05538 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 AC007389.2-201ENST00000434630 306 ntBASIC3.64□□□□□ -1.83
HLA-DQB2P05538 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 AC018635.1-201ENST00000468292 1030 ntBASIC3.64□□□□□ -1.83
HLA-DQB2P05538 FTH1P24-201ENST00000503502 462 ntBASIC3.64□□□□□ -1.83
HLA-DQB2P05538 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 RNU1-95P-201ENST00000516357 160 ntBASIC3.64□□□□□ -1.83
HLA-DQB2P05538 RNU1-128P-201ENST00000516704 160 ntBASIC3.64□□□□□ -1.83
HLA-DQB2P05538 RNU6-579P-201ENST00000516879 102 ntBASIC3.64□□□□□ -1.83
HLA-DQB2P05538 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 AC006946.3-201ENST00000609791 756 ntBASIC3.64□□□□□ -1.83
HLA-DQB2P05538 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 AL356863.1-201ENST00000623378 1080 ntBASIC3.64□□□□□ -1.83
HLA-DQB2P05538 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 CEP170P1-201ENST00000502249 4587 ntBASIC3.64□□□□□ -1.83
HLA-DQB2P05538 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
HLA-DQB2P05538 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
HLA-DQB2P05538 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.63□□□□□ -1.83
HLA-DQB2P05538 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DQB2P05538 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
HLA-DQB2P05538 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.63□□□□□ -1.83
HLA-DQB2P05538 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DQB2P05538 SNORA5A-201ENST00000384111 134 ntBASIC3.63□□□□□ -1.83
HLA-DQB2P05538 MIR554-201ENST00000384874 96 ntBASIC3.63□□□□□ -1.83
HLA-DQB2P05538 U3.39-201ENST00000408569 239 ntBASIC3.63□□□□□ -1.83
HLA-DQB2P05538 MTND4P22-201ENST00000413116 1169 ntBASIC3.63□□□□□ -1.83
HLA-DQB2P05538 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.63□□□□□ -1.83
HLA-DQB2P05538 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC3.63□□□□□ -1.83
HLA-DQB2P05538 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.63□□□□□ -1.83
HLA-DQB2P05538 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DQB2P05538 AC122718.1-201ENST00000439448 744 ntBASIC3.63□□□□□ -1.83
HLA-DQB2P05538 AC022431.1-201ENST00000450941 438 ntBASIC3.63□□□□□ -1.83
HLA-DQB2P05538 ANP32BP2-201ENST00000454525 545 ntBASIC3.63□□□□□ -1.83
HLA-DQB2P05538 FAM133DP-201ENST00000464802 691 ntBASIC3.63□□□□□ -1.83
HLA-DQB2P05538 AC105918.1-201ENST00000474399 838 ntBASIC3.63□□□□□ -1.83
HLA-DQB2P05538 HMGB3P14-201ENST00000494195 599 ntBASIC3.63□□□□□ -1.83
HLA-DQB2P05538 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DQB2P05538 AC104619.4-201ENST00000510773 249 ntBASIC3.63□□□□□ -1.83
HLA-DQB2P05538 MIR2114-201ENST00000516645 80 ntBASIC3.63□□□□□ -1.83
HLA-DQB2P05538 AC023632.4-201ENST00000517783 191 ntBASIC3.63□□□□□ -1.83
HLA-DQB2P05538 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DQB2P05538 FAM106CP-201ENST00000582212 507 ntBASIC3.63□□□□□ -1.83
HLA-DQB2P05538 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.63□□□□□ -1.83
HLA-DQB2P05538 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.63□□□□□ -1.83
HLA-DQB2P05538 AC069209.1-201ENST00000619282 651 ntBASIC3.63□□□□□ -1.83
HLA-DQB2P05538 AL161637.1-201ENST00000622380 412 ntBASIC3.63□□□□□ -1.83
HLA-DQB2P05538 AC067852.7-201ENST00000623270 535 ntBASIC3.63□□□□□ -1.83
HLA-DQB2P05538 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DQB2P05538 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DQB2P05538 AL356489.2-201ENST00000566968 3528 ntBASIC3.63□□□□□ -1.83
HLA-DQB2P05538 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
HLA-DQB2P05538 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DQB2P05538 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.62□□□□□ -1.83
HLA-DQB2P05538 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DQB2P05538 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DQB2P05538 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DQB2P05538 RNA5SP235-201ENST00000365411 114 ntBASIC3.62□□□□□ -1.83
HLA-DQB2P05538 RN7SKP53-201ENST00000411337 315 ntBASIC3.62□□□□□ -1.83
HLA-DQB2P05538 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DQB2P05538 AC092017.2-201ENST00000427600 362 ntBASIC3.62□□□□□ -1.83
HLA-DQB2P05538 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.62□□□□□ -1.83
HLA-DQB2P05538 AC018644.1-201ENST00000429934 551 ntBASIC3.62□□□□□ -1.83
HLA-DQB2P05538 RPS29P31-201ENST00000446147 164 ntBASIC3.62□□□□□ -1.83
HLA-DQB2P05538 AC099063.2-201ENST00000446360 662 ntBASIC3.62□□□□□ -1.83
HLA-DQB2P05538 AC243772.1-201ENST00000451620 410 ntBASIC3.62□□□□□ -1.83
HLA-DQB2P05538 AL672167.3-201ENST00000465951 960 ntBASIC3.62□□□□□ -1.83
HLA-DQB2P05538 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DQB2P05538 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DQB2P05538 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DQB2P05538 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.62□□□□□ -1.83
HLA-DQB2P05538 TRMT10BP1-201ENST00000519377 943 ntBASIC3.62□□□□□ -1.83
HLA-DQB2P05538 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.62□□□□□ -1.83
HLA-DQB2P05538 AP006245.1-201ENST00000522549 120 ntBASIC3.62□□□□□ -1.83
HLA-DQB2P05538 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.62□□□□□ -1.83
HLA-DQB2P05538 MTCO1P49-201ENST00000523429 802 ntBASIC3.62□□□□□ -1.83
HLA-DQB2P05538 AC068446.3-201ENST00000555285 382 ntBASIC3.62□□□□□ -1.83
HLA-DQB2P05538 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.62□□□□□ -1.83
HLA-DQB2P05538 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DQB2P05538 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.62□□□□□ -1.83
HLA-DQB2P05538 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DQB2P05538 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DQB2P05538 AC141257.3-201ENST00000572906 215 ntBASIC3.62□□□□□ -1.83
HLA-DQB2P05538 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.62□□□□□ -1.83
HLA-DQB2P05538 AC078899.5-201ENST00000612475 178 ntBASIC3.62□□□□□ -1.83
HLA-DQB2P05538 CR392039.5-201ENST00000623201 510 ntBASIC3.62□□□□□ -1.83
HLA-DQB2P05538 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DQB2P05538 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DQB2P05538 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms