Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC068057.2-201ENST00000624047 895 ntBASIC4.45□□□□□ -1.7
COL2A1P02458 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.45□□□□□ -1.7
COL2A1P02458 AC099654.9-201ENST00000637055 678 ntBASIC4.45□□□□□ -1.7
COL2A1P02458 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.45□□□□□ -1.7
COL2A1P02458 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL2A1P02458 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL2A1P02458 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
COL2A1P02458 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.45□□□□□ -1.7
COL2A1P02458 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL2A1P02458 AC074029.4-201ENST00000624796 1859 ntBASIC4.45□□□□□ -1.7
COL2A1P02458 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.45□□□□□ -1.7
COL2A1P02458 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL2A1P02458 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
COL2A1P02458 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.45□□□□□ -1.7
COL2A1P02458 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
COL2A1P02458 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
COL2A1P02458 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL2A1P02458 RNU4-40P-201ENST00000364351 143 ntBASIC4.44□□□□□ -1.7
COL2A1P02458 Y_RNA.500-201ENST00000384466 111 ntBASIC4.44□□□□□ -1.7
COL2A1P02458 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.44□□□□□ -1.7
COL2A1P02458 MIR1289-1-201ENST00000408836 144 ntBASIC4.44□□□□□ -1.7
COL2A1P02458 GNG5P5-201ENST00000420444 220 ntBASIC4.44□□□□□ -1.7
COL2A1P02458 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.44□□□□□ -1.7
COL2A1P02458 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.44□□□□□ -1.7
COL2A1P02458 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.44□□□□□ -1.7
COL2A1P02458 AC114878.1-201ENST00000441166 358 ntBASIC4.44□□□□□ -1.7
COL2A1P02458 TPTE2P3-201ENST00000441562 1189 ntBASIC4.44□□□□□ -1.7
COL2A1P02458 VN1R96P-201ENST00000446052 858 ntBASIC4.44□□□□□ -1.7
COL2A1P02458 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.44□□□□□ -1.7
COL2A1P02458 AC108941.1-201ENST00000502853 530 ntBASIC4.44□□□□□ -1.7
COL2A1P02458 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.44□□□□□ -1.7
COL2A1P02458 MTATP6P9-201ENST00000515039 680 ntBASIC4.44□□□□□ -1.7
COL2A1P02458 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.44□□□□□ -1.7
COL2A1P02458 RNA5SP208-201ENST00000516156 78 ntBASIC4.44□□□□□ -1.7
COL2A1P02458 RN7SKP289-201ENST00000517244 295 ntBASIC4.44□□□□□ -1.7
COL2A1P02458 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.44□□□□□ -1.7
COL2A1P02458 CIR1P1-201ENST00000524055 1133 ntBASIC4.44□□□□□ -1.7
COL2A1P02458 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.44□□□□□ -1.7
COL2A1P02458 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL2A1P02458 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL2A1P02458 MTCYBP27-201ENST00000555160 670 ntBASIC4.44□□□□□ -1.7
COL2A1P02458 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.44□□□□□ -1.7
COL2A1P02458 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.44□□□□□ -1.7
COL2A1P02458 MTATP6P24-201ENST00000576835 677 ntBASIC4.44□□□□□ -1.7
COL2A1P02458 AC115621.1-201ENST00000604653 858 ntBASIC4.44□□□□□ -1.7
COL2A1P02458 AC112220.2-201ENST00000605513 533 ntBASIC4.44□□□□□ -1.7
COL2A1P02458 AP003072.5-201ENST00000623872 773 ntBASIC4.44□□□□□ -1.7
COL2A1P02458 AP003485.1-201ENST00000625093 753 ntBASIC4.44□□□□□ -1.7
COL2A1P02458 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.44□□□□□ -1.7
COL2A1P02458 AP000553.6-201ENST00000641242 118 ntBASIC4.44□□□□□ -1.7
COL2A1P02458 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.44□□□□□ -1.7
COL2A1P02458 PRO1804-201ENST00000623780 2050 ntBASIC4.44□□□□□ -1.7
COL2A1P02458 IPO8P1-201ENST00000455509 3109 ntBASIC4.44□□□□□ -1.7
COL2A1P02458 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL2A1P02458 AP001284.1-201ENST00000528393 2118 ntBASIC4.44□□□□□ -1.7
COL2A1P02458 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL2A1P02458 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL2A1P02458 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
COL2A1P02458 RNA5SP267-201ENST00000364893 126 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.43□□□□□ -1.7
COL2A1P02458 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
COL2A1P02458 RPL7P60-201ENST00000397636 735 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 DHFRP5-201ENST00000406944 564 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 RPS29P4-201ENST00000414733 161 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.43□□□□□ -1.7
COL2A1P02458 RPS7P15-201ENST00000415804 584 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 AC011242.1-201ENST00000433596 1158 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.43□□□□□ -1.7
COL2A1P02458 HSPD1P21-201ENST00000436541 245 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 AC069285.2-201ENST00000440210 275 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 AL691517.1-201ENST00000440833 1235 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.43□□□□□ -1.7
COL2A1P02458 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC4.43□□□□□ -1.7
COL2A1P02458 MTND1P31-201ENST00000449206 961 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 SNORD105B-201ENST00000458770 79 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.43□□□□□ -1.7
COL2A1P02458 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.43□□□□□ -1.7
COL2A1P02458 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.43□□□□□ -1.7
COL2A1P02458 AC034244.2-201ENST00000514668 858 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.43□□□□□ -1.7
COL2A1P02458 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.43□□□□□ -1.7
COL2A1P02458 AP001372.4-201ENST00000524889 472 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 OR7E13P-201ENST00000526052 910 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.43□□□□□ -1.7
COL2A1P02458 AC233702.9-201ENST00000581528 203 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 AC245128.3-201ENST00000594721 748 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 AL137843.1-201ENST00000605078 385 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 AC104307.1-201ENST00000616142 196 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 AL669942.2-201ENST00000620352 697 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 SCARNA15.3-201ENST00000626315 122 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 SCARNA4.1-201ENST00000628597 123 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.43□□□□□ -1.7
COL2A1P02458 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL2A1P02458 AC005261.6-201ENST00000623072 1387 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.43□□□□□ -1.7
COL2A1P02458 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL2A1P02458 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL2A1P02458 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL2A1P02458 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL2A1P02458 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms