Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC006115.2-201ENST00000596823 202 ntBASIC5.21□□□□□ -1.58
CNOT4O95628 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CNOT4O95628 AL008729.2-201ENST00000606393 473 ntBASIC5.21□□□□□ -1.58
CNOT4O95628 SDR42E1P1-201ENST00000611327 477 ntBASIC5.21□□□□□ -1.58
CNOT4O95628 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.21□□□□□ -1.58
CNOT4O95628 MIR6863-201ENST00000636112 90 ntBASIC5.21□□□□□ -1.58
CNOT4O95628 MKKS-204ENST00000639674 192 ntBASIC5.21□□□□□ -1.58
CNOT4O95628 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
CNOT4O95628 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CNOT4O95628 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.21□□□□□ -1.58
CNOT4O95628 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CNOT4O95628 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.21□□□□□ -1.58
CNOT4O95628 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CNOT4O95628 AP000473.2-201ENST00000602659 1537 ntBASIC5.21□□□□□ -1.58
CNOT4O95628 PANDAR-201ENST00000629595 1506 ntBASIC5.21□□□□□ -1.58
CNOT4O95628 AC140134.1-201ENST00000511830 3544 ntBASIC5.21□□□□□ -1.58
CNOT4O95628 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
CNOT4O95628 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.21□□□□□ -1.58
CNOT4O95628 AL049555.1-201ENST00000562834 1933 ntBASIC5.21□□□□□ -1.58
CNOT4O95628 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CNOT4O95628 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CNOT4O95628 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CNOT4O95628 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNOT4O95628 CASC19-204ENST00000641001 2055 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNOT4O95628 CDR1-202ENST00000625883 1485 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CNOT4O95628 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CNOT4O95628 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNOT4O95628 MTND4P16-201ENST00000466108 1367 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
CNOT4O95628 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CNOT4O95628 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
CNOT4O95628 WDR95P-201ENST00000425638 1542 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNOT4O95628 Y_RNA.296-201ENST00000364930 108 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 GNG5P2-201ENST00000372054 207 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 RNU6-723P-201ENST00000383973 107 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 MIR1178-201ENST00000408396 91 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 RNU6-272P-201ENST00000411028 104 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 AL450992.3-201ENST00000413192 568 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.2□□□□□ -1.58
CNOT4O95628 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC5.2□□□□□ -1.58
CNOT4O95628 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.2□□□□□ -1.58
CNOT4O95628 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.2□□□□□ -1.58
CNOT4O95628 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.2□□□□□ -1.58
CNOT4O95628 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.2□□□□□ -1.58
CNOT4O95628 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CNOT4O95628 AL138785.1-201ENST00000425821 331 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CNOT4O95628 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.2□□□□□ -1.58
CNOT4O95628 RPL37P1-201ENST00000432310 284 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.2□□□□□ -1.58
CNOT4O95628 TXNP5-201ENST00000441043 315 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CNOT4O95628 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.2□□□□□ -1.58
CNOT4O95628 AL596266.1-201ENST00000448132 400 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 RPL39P6-201ENST00000448289 150 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.2□□□□□ -1.58
CNOT4O95628 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.2□□□□□ -1.58
CNOT4O95628 snoU109.1-201ENST00000459339 135 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 AC112206.1-201ENST00000468416 477 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 AC109481.1-201ENST00000509173 282 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 AC048346.1-201ENST00000510247 144 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.2□□□□□ -1.58
CNOT4O95628 RNU6-430P-201ENST00000517078 107 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CNOT4O95628 OR5M7P-201ENST00000526140 972 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.2□□□□□ -1.58
CNOT4O95628 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC5.2□□□□□ -1.58
CNOT4O95628 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.2□□□□□ -1.58
CNOT4O95628 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.2□□□□□ -1.58
CNOT4O95628 AL121594.2-201ENST00000541658 472 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.2□□□□□ -1.58
CNOT4O95628 CENPUP2-201ENST00000555897 1186 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 AL138976.2-201ENST00000563989 694 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 AC136618.2-201ENST00000575091 400 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 AP005119.2-201ENST00000579735 1105 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.2□□□□□ -1.58
CNOT4O95628 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.2□□□□□ -1.58
CNOT4O95628 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.2□□□□□ -1.58
CNOT4O95628 AC091488.1-201ENST00000604239 660 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 AL161729.4-201ENST00000604650 476 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 RNU6-88P-201ENST00000606801 100 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 AC103710.1-201ENST00000610003 901 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 RNA5SP440-201ENST00000612665 119 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.2□□□□□ -1.58
CNOT4O95628 AC069234.4-201ENST00000621276 412 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 AL136221.1-201ENST00000621449 509 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 AL359880.1-201ENST00000621879 266 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.2□□□□□ -1.58
CNOT4O95628 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.2□□□□□ -1.58
CNOT4O95628 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.2□□□□□ -1.58
CNOT4O95628 BMS1P21-201ENST00000634565 365 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 CRYM-AS1-204ENST00000637983 556 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 AL031985.3-201ENST00000565390 2449 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNOT4O95628 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CNOT4O95628 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms