Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RPL7AP52-201ENST00000458096 790 ntBASIC3.85□□□□□ -1.79
SHOX2O60902 RN7SL442P-201ENST00000473804 320 ntBASIC3.85□□□□□ -1.79
SHOX2O60902 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.85□□□□□ -1.79
SHOX2O60902 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.85□□□□□ -1.79
SHOX2O60902 AC111000.3-201ENST00000508057 576 ntBASIC3.85□□□□□ -1.79
SHOX2O60902 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.85□□□□□ -1.79
SHOX2O60902 AC009643.1-201ENST00000532030 391 ntBASIC3.85□□□□□ -1.79
SHOX2O60902 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHOX2O60902 AC106785.3-201ENST00000564064 847 ntBASIC3.85□□□□□ -1.79
SHOX2O60902 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.85□□□□□ -1.79
SHOX2O60902 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHOX2O60902 AC093765.1-201ENST00000603758 881 ntBASIC3.85□□□□□ -1.79
SHOX2O60902 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHOX2O60902 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHOX2O60902 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.85□□□□□ -1.79
SHOX2O60902 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHOX2O60902 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
SHOX2O60902 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SHOX2O60902 RNU1-75P-201ENST00000347264 129 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
SHOX2O60902 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SHOX2O60902 RNA5SP171-201ENST00000391071 115 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.84□□□□□ -1.79
SHOX2O60902 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SHOX2O60902 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.84□□□□□ -1.79
SHOX2O60902 AC091390.3-201ENST00000426478 338 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 DPY19L1P2-201ENST00000426647 915 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 AL158071.1-201ENST00000430315 461 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 MTCO3P21-201ENST00000430791 643 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.84□□□□□ -1.79
SHOX2O60902 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.84□□□□□ -1.79
SHOX2O60902 Z95327.1-201ENST00000446082 482 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.84□□□□□ -1.79
SHOX2O60902 RPL7P32-201ENST00000457119 744 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
SHOX2O60902 RN7SL98P-201ENST00000462271 300 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 RPL23AP44-201ENST00000482216 473 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 RPL35P6-201ENST00000490024 372 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.84□□□□□ -1.79
SHOX2O60902 AP002812.1-201ENST00000495378 474 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 TXNP6-201ENST00000510190 310 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.84□□□□□ -1.79
SHOX2O60902 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 AC010476.1-201ENST00000519111 851 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 AC022616.2-201ENST00000523185 300 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SHOX2O60902 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.84□□□□□ -1.79
SHOX2O60902 AC006518.1-201ENST00000541449 943 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 AC008011.1-201ENST00000545989 227 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 AC084824.1-201ENST00000550917 1005 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.84□□□□□ -1.79
SHOX2O60902 AC008507.1-201ENST00000587506 734 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.84□□□□□ -1.79
SHOX2O60902 AC018816.2-201ENST00000621460 353 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 AC000123.2-201ENST00000623124 461 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
SHOX2O60902 AL122126.1-201ENST00000546905 1318 ntBASIC3.84□□□□□ -1.79
SHOX2O60902 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SHOX2O60902 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SHOX2O60902 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.84□□□□□ -1.79
SHOX2O60902 OR56B2P-202ENST00000641377 2453 ntBASIC3.84□□□□□ -1.8
SHOX2O60902 AL137100.1-201ENST00000556703 1620 ntBASIC3.84□□□□□ -1.8
SHOX2O60902 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.84□□□□□ -1.8
SHOX2O60902 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.84□□□□□ -1.8
SHOX2O60902 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.84□□□□□ -1.8
SHOX2O60902 AL513302.2-201ENST00000562313 1842 ntBASIC3.84□□□□□ -1.8
SHOX2O60902 AC009951.1-201ENST00000623674 2614 ntBASIC3.83□□□□□ -1.8
SHOX2O60902 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.83□□□□□ -1.8
SHOX2O60902 SNORA62.2-201ENST00000364672 152 ntBASIC3.83□□□□□ -1.8
SHOX2O60902 RNU6-805P-201ENST00000365643 106 ntBASIC3.83□□□□□ -1.8
SHOX2O60902 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHOX2O60902 EI24P2-201ENST00000397776 1076 ntBASIC3.83□□□□□ -1.8
SHOX2O60902 AL445189.1-201ENST00000405722 338 ntBASIC3.83□□□□□ -1.8
SHOX2O60902 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.83□□□□□ -1.8
SHOX2O60902 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.83□□□□□ -1.8
SHOX2O60902 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.83□□□□□ -1.8
SHOX2O60902 AL691447.1-201ENST00000419456 387 ntBASIC3.83□□□□□ -1.8
SHOX2O60902 AC006989.1-201ENST00000427212 131 ntBASIC3.83□□□□□ -1.8
SHOX2O60902 HIGD1AP12-201ENST00000427832 281 ntBASIC3.83□□□□□ -1.8
SHOX2O60902 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.83□□□□□ -1.8
SHOX2O60902 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.83□□□□□ -1.8
SHOX2O60902 RPS3AP54-201ENST00000435535 734 ntBASIC3.83□□□□□ -1.8
SHOX2O60902 AC074367.1-201ENST00000438685 1125 ntBASIC3.83□□□□□ -1.8
SHOX2O60902 RPS4XP4-201ENST00000443195 763 ntBASIC3.83□□□□□ -1.8
SHOX2O60902 MTCO3P17-201ENST00000443775 513 ntBASIC3.83□□□□□ -1.8
SHOX2O60902 RANP8-201ENST00000444720 713 ntBASIC3.83□□□□□ -1.8
SHOX2O60902 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.83□□□□□ -1.8
SHOX2O60902 SNORA84-201ENST00000459229 133 ntBASIC3.83□□□□□ -1.8
SHOX2O60902 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SHOX2O60902 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.83□□□□□ -1.8
SHOX2O60902 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SHOX2O60902 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.83□□□□□ -1.8
SHOX2O60902 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.83□□□□□ -1.8
SHOX2O60902 SNORD116-26-201ENST00000516006 96 ntBASIC3.83□□□□□ -1.8
SHOX2O60902 RNA5SP208-201ENST00000516156 78 ntBASIC3.83□□□□□ -1.8
SHOX2O60902 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.83□□□□□ -1.8
SHOX2O60902 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.83□□□□□ -1.8
SHOX2O60902 MED28P5-201ENST00000528254 438 ntBASIC3.83□□□□□ -1.8
SHOX2O60902 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms