Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RPL7P53-201ENST00000421245 739 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.08□□□□□ -1.92
SDCBPO00560 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SDCBPO00560 RPL21P71-201ENST00000465598 459 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 RN7SL132P-201ENST00000478131 296 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 VN1R105P-201ENST00000486595 910 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 FCF1P3-201ENST00000496394 590 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
SDCBPO00560 AC026784.1-201ENST00000507986 352 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 PCBP2P3-201ENST00000509726 843 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.08□□□□□ -1.92
SDCBPO00560 AC109635.6-201ENST00000525487 1113 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.08□□□□□ -1.92
SDCBPO00560 OR8R1P-201ENST00000543943 764 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.08□□□□□ -1.92
SDCBPO00560 AC023161.2-201ENST00000551218 780 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 AC007224.1-201ENST00000564410 144 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 HNRNPCP4-201ENST00000571636 900 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.08□□□□□ -1.92
SDCBPO00560 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.08□□□□□ -1.92
SDCBPO00560 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.08□□□□□ -1.92
SDCBPO00560 AC053481.4-201ENST00000583164 216 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.08□□□□□ -1.92
SDCBPO00560 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.08□□□□□ -1.92
SDCBPO00560 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.08□□□□□ -1.92
SDCBPO00560 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.08□□□□□ -1.92
SDCBPO00560 AC008121.2-201ENST00000614647 523 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.08□□□□□ -1.92
SDCBPO00560 FP236240.3-201ENST00000623061 327 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 CDRT1-208ENST00000630868 794 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.08□□□□□ -1.92
SDCBPO00560 AL732372.2-225ENST00000642124 456 ntBASIC3.08□□□□□ -1.92
SDCBPO00560 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
SDCBPO00560 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SDCBPO00560 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.07□□□□□ -1.92
SDCBPO00560 AC009313.2-201ENST00000417893 1941 ntBASIC3.07□□□□□ -1.92
SDCBPO00560 AL049555.1-201ENST00000562834 1933 ntBASIC3.07□□□□□ -1.92
SDCBPO00560 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.07□□□□□ -1.92
SDCBPO00560 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.07□□□□□ -1.92
SDCBPO00560 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
SDCBPO00560 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SDCBPO00560 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SDCBPO00560 MAPK10-372ENST00000641954 3413 ntBASIC3.07□□□□□ -1.92
SDCBPO00560 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.07□□□□□ -1.92
SDCBPO00560 RNU6-603P-201ENST00000411403 107 ntBASIC3.07□□□□□ -1.92
SDCBPO00560 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.07□□□□□ -1.92
SDCBPO00560 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.07□□□□□ -1.92
SDCBPO00560 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.07□□□□□ -1.92
SDCBPO00560 RPL7P2-201ENST00000427639 268 ntBASIC3.07□□□□□ -1.92
SDCBPO00560 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.07□□□□□ -1.92
SDCBPO00560 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.07□□□□□ -1.92
SDCBPO00560 AL645931.1-201ENST00000439737 410 ntBASIC3.07□□□□□ -1.92
SDCBPO00560 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.07□□□□□ -1.92
SDCBPO00560 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.07□□□□□ -1.92
SDCBPO00560 VN1R96P-201ENST00000446052 858 ntBASIC3.07□□□□□ -1.92
SDCBPO00560 IFNWP4-201ENST00000453148 294 ntBASIC3.07□□□□□ -1.92
SDCBPO00560 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.07□□□□□ -1.92
SDCBPO00560 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.07□□□□□ -1.92
SDCBPO00560 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SDCBPO00560 USP9YP5-201ENST00000511770 630 ntBASIC3.07□□□□□ -1.92
SDCBPO00560 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.07□□□□□ -1.92
SDCBPO00560 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.07□□□□□ -1.92
SDCBPO00560 ARL2BPP6-201ENST00000512757 439 ntBASIC3.07□□□□□ -1.92
SDCBPO00560 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.07□□□□□ -1.92
SDCBPO00560 RNU6-352P-201ENST00000516908 107 ntBASIC3.07□□□□□ -1.92
SDCBPO00560 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.07□□□□□ -1.92
SDCBPO00560 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC3.07□□□□□ -1.92
SDCBPO00560 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SDCBPO00560 AC136624.4-201ENST00000573044 370 ntBASIC3.07□□□□□ -1.92
SDCBPO00560 BMS1P7-201ENST00000602440 1052 ntBASIC3.07□□□□□ -1.92
SDCBPO00560 AC123786.2-201ENST00000603459 275 ntBASIC3.07□□□□□ -1.92
SDCBPO00560 AC115621.1-201ENST00000604653 858 ntBASIC3.07□□□□□ -1.92
SDCBPO00560 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.07□□□□□ -1.92
SDCBPO00560 AL365503.1-201ENST00000605247 905 ntBASIC3.07□□□□□ -1.92
SDCBPO00560 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.07□□□□□ -1.92
SDCBPO00560 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.07□□□□□ -1.92
SDCBPO00560 AC090912.3-201ENST00000609775 533 ntBASIC3.07□□□□□ -1.92
SDCBPO00560 RMST_8.1-201ENST00000610287 165 ntBASIC3.07□□□□□ -1.92
SDCBPO00560 AC116447.1-201ENST00000613153 453 ntBASIC3.07□□□□□ -1.92
SDCBPO00560 AL354798.1-201ENST00000622505 329 ntBASIC3.07□□□□□ -1.92
SDCBPO00560 AC000123.2-201ENST00000623124 461 ntBASIC3.07□□□□□ -1.92
SDCBPO00560 RNA5SP196-201ENST00000625967 102 ntBASIC3.07□□□□□ -1.92
SDCBPO00560 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.07□□□□□ -1.92
SDCBPO00560 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.07□□□□□ -1.92
SDCBPO00560 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.07□□□□□ -1.92
SDCBPO00560 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SDCBPO00560 AC024560.2-201ENST00000507981 1497 ntBASIC3.07□□□□□ -1.92
SDCBPO00560 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.07□□□□□ -1.92
SDCBPO00560 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SDCBPO00560 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SDCBPO00560 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SDCBPO00560 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SDCBPO00560 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SDCBPO00560 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SDCBPO00560 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SDCBPO00560 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SDCBPO00560 RNA5SP42-201ENST00000364278 115 ntBASIC3.06□□□□□ -1.92
SDCBPO00560 RNU6-673P-201ENST00000365084 104 ntBASIC3.06□□□□□ -1.92
SDCBPO00560 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.06□□□□□ -1.92
SDCBPO00560 MIR30B-201ENST00000384850 88 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms