Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.04□□□□□ -1.76
SLC28A1O00337 AK3P4-201ENST00000504283 583 ntBASIC4.04□□□□□ -1.76
SLC28A1O00337 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.04□□□□□ -1.76
SLC28A1O00337 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SLC28A1O00337 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.04□□□□□ -1.76
SLC28A1O00337 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.04□□□□□ -1.76
SLC28A1O00337 PTP4A1P6-201ENST00000531034 478 ntBASIC4.04□□□□□ -1.76
SLC28A1O00337 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.04□□□□□ -1.76
SLC28A1O00337 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.04□□□□□ -1.76
SLC28A1O00337 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.04□□□□□ -1.76
SLC28A1O00337 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.04□□□□□ -1.76
SLC28A1O00337 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.04□□□□□ -1.76
SLC28A1O00337 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.04□□□□□ -1.76
SLC28A1O00337 AC005191.1-201ENST00000603950 358 ntBASIC4.04□□□□□ -1.76
SLC28A1O00337 AC091488.1-201ENST00000604239 660 ntBASIC4.04□□□□□ -1.76
SLC28A1O00337 AC093875.1-201ENST00000623688 504 ntBASIC4.04□□□□□ -1.76
SLC28A1O00337 ZNF849P-201ENST00000594711 1566 ntBASIC4.04□□□□□ -1.76
SLC28A1O00337 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SLC28A1O00337 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.04□□□□□ -1.76
SLC28A1O00337 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SLC28A1O00337 MFSD8-220ENST00000641243 1422 ntBASIC4.04□□□□□ -1.76
SLC28A1O00337 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC28A1O00337 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC28A1O00337 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SLC28A1O00337 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SLC28A1O00337 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SLC28A1O00337 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC28A1O00337 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC28A1O00337 RNU6-1293P-201ENST00000384077 107 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 SNORD65C-201ENST00000390962 71 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 SNORA3C-201ENST00000408792 125 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC28A1O00337 MFSD13B-201ENST00000420133 1290 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 AC069213.2-201ENST00000420238 366 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 BRWD1P3-201ENST00000428816 390 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.03□□□□□ -1.76
SLC28A1O00337 RPL23AP46-201ENST00000438548 490 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 AC004865.1-201ENST00000442276 1003 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC28A1O00337 AL929288.2-201ENST00000446368 407 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 RPL23AP15-201ENST00000450202 459 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 RPL23AP72-201ENST00000492447 435 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 AC139783.2-201ENST00000504847 1145 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.03□□□□□ -1.76
SLC28A1O00337 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.03□□□□□ -1.76
SLC28A1O00337 NDUFB4P12-201ENST00000513465 390 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 RNU5A-7P-201ENST00000515979 116 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.03□□□□□ -1.76
SLC28A1O00337 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SLC28A1O00337 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.03□□□□□ -1.76
SLC28A1O00337 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.03□□□□□ -1.76
SLC28A1O00337 AC074029.1-201ENST00000552531 1044 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.03□□□□□ -1.76
SLC28A1O00337 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.03□□□□□ -1.76
SLC28A1O00337 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC28A1O00337 AP002906.1-201ENST00000603405 233 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 AC010680.3-201ENST00000604215 520 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 AC115621.1-201ENST00000604653 858 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 AC092574.1-201ENST00000609771 420 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 FAM27D1-201ENST00000612308 341 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 AC018926.1-201ENST00000616335 435 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC28A1O00337 AL121890.3-201ENST00000618494 516 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 RNU6-156P-201ENST00000621869 107 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 AP000943.4-201ENST00000622912 357 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 AL445363.3-201ENST00000623080 671 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 AC068880.4-201ENST00000623082 495 ntBASIC4.03□□□□□ -1.76
SLC28A1O00337 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.03□□□□□ -1.76
SLC28A1O00337 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC28A1O00337 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SLC28A1O00337 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC28A1O00337 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.03□□□□□ -1.76
SLC28A1O00337 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SLC28A1O00337 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC28A1O00337 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SLC28A1O00337 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.02□□□□□ -1.77
SLC28A1O00337 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SLC28A1O00337 ERCC6-202ENST00000374127 1782 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SLC28A1O00337 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SLC28A1O00337 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.02□□□□□ -1.77
SLC28A1O00337 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.02□□□□□ -1.77
SLC28A1O00337 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.02□□□□□ -1.77
SLC28A1O00337 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SLC28A1O00337 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SLC28A1O00337 RNU6-468P-201ENST00000384003 109 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 RPL22P22-201ENST00000395439 379 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 RNU6-77P-201ENST00000410554 91 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 RNA5SP306-201ENST00000411087 107 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 AL590139.1-201ENST00000416267 400 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 AC119751.6-201ENST00000416712 186 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 AC246680.2-201ENST00000422106 389 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 AC008065.1-201ENST00000428525 348 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.02□□□□□ -1.77
SLC28A1O00337 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC28A1O00337 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC28A1O00337 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC28A1O00337 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms