Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RN7SKP273-201ENST00000411392 314 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 UBE2V1P11-201ENST00000411559 285 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 COX6B1P1-201ENST00000415962 213 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 AC106883.1-201ENST00000418805 562 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 OR6K4P-201ENST00000423179 955 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 RPL23AP81-201ENST00000455252 467 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 DUXAP8-207ENST00000456786 622 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 RPL36AP13-201ENST00000457490 317 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 HPRT1P2-201ENST00000505250 544 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 BTF3L4P4-201ENST00000506381 449 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 RNU6-276P-201ENST00000516114 96 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 RNU6-1004P-201ENST00000516584 111 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 OR7E13P-201ENST00000526052 910 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 AL109741.3-201ENST00000561748 592 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 AL022067.1-201ENST00000602426 454 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 DUXAP10-204ENST00000612052 616 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 AL590396.4-201ENST00000636779 956 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 MARK2P15-201ENST00000432204 2186 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.04□□□□□ -1.76
NDE1Q9NXR1 IPO8P1-201ENST00000455509 3109 ntBASIC4.04□□□□□ -1.76
NDE1Q9NXR1 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 CCT8P1-201ENST00000413611 1657 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AC009313.2-201ENST00000417893 1941 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 RNU5E-10P-201ENST00000363506 118 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 SNORA58B-201ENST00000364259 136 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 SNORA62.2-201ENST00000364672 152 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 SNORA37-201ENST00000384504 129 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 RN7SKP222-201ENST00000410651 315 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 RPL7P53-201ENST00000421245 739 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AC004074.1-201ENST00000421810 1063 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AC007394.1-201ENST00000421941 531 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 IFNNP1-201ENST00000429219 553 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 RBMY2QP-201ENST00000429799 1147 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 MTCO1P52-201ENST00000433928 531 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AC000041.1-201ENST00000439655 175 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 EXTL2P1-201ENST00000446218 416 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AC063943.1-201ENST00000465434 453 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AC096571.1-202ENST00000506634 735 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 MTND1P24-201ENST00000552175 861 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 GNRHR2P1-201ENST00000555315 631 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AC009117.1-201ENST00000563948 554 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AC007599.1-201ENST00000568688 1174 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AP001160.4-201ENST00000596971 382 ntBASIC4.03□□□□□ -1.76
NDE1Q9NXR1 AC011374.2-201ENST00000607135 526 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms