Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 MTCYBP15-201ENST00000433123 1127 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 TBCAP1-201ENST00000436520 327 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 MTCO1P53-201ENST00000441633 699 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AL031313.1-201ENST00000448435 256 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 RPS11P1-201ENST00000451072 473 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 FABP3P2-201ENST00000453169 399 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AC008280.2-201ENST00000455473 307 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 Y_RNA.717-201ENST00000517106 92 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AC022882.1-201ENST00000532142 501 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AL109741.3-201ENST00000561748 592 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 IPO5P1-202ENST00000600039 287 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AC018618.2-201ENST00000604770 446 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 ARF4P1-201ENST00000605447 541 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AC128687.2-201ENST00000609657 566 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AL445423.1-201ENST00000609941 536 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 MIR6868-201ENST00000611215 58 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AL356863.1-201ENST00000623378 1080 ntBASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SIX2Q9NPC8 USP9YP4-201ENST00000424401 1745 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SIX2Q9NPC8 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SIX2Q9NPC8 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.32□□□□□ -1.72
SIX2Q9NPC8 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.32□□□□□ -1.72
SIX2Q9NPC8 SNORA60-201ENST00000362396 134 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 RNA5SP399-201ENST00000364003 117 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 LAP3P1-201ENST00000403648 294 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.32□□□□□ -1.72
SIX2Q9NPC8 YWHAEP5-201ENST00000431545 765 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.32□□□□□ -1.72
SIX2Q9NPC8 AC083863.1-201ENST00000438811 231 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.32□□□□□ -1.72
SIX2Q9NPC8 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.32□□□□□ -1.72
SIX2Q9NPC8 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.32□□□□□ -1.72
SIX2Q9NPC8 RPL38P1-201ENST00000460914 211 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 RN7SL271P-201ENST00000487601 295 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.32□□□□□ -1.72
SIX2Q9NPC8 AC026414.1-201ENST00000504046 698 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 AC098862.1-201ENST00000504991 413 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 IGBP1P5-201ENST00000507524 1000 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SIX2Q9NPC8 HPRT1P1-201ENST00000509498 657 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 RN7SKP265-201ENST00000516448 223 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 MIR4789-201ENST00000577469 82 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 AC069366.1-201ENST00000583159 838 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.32□□□□□ -1.72
SIX2Q9NPC8 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.32□□□□□ -1.72
SIX2Q9NPC8 AL160237.3-201ENST00000604114 1013 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 AL157392.4-201ENST00000609756 345 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 AC005962.2-201ENST00000611427 652 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 AC140725.3-201ENST00000616193 880 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 AL356274.1-201ENST00000617064 410 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 AC022079.2-201ENST00000619739 566 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 MIR4727-201ENST00000622232 55 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 AC024023.1-201ENST00000624530 922 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 AC010608.2-201ENST00000624830 470 ntBASIC4.32□□□□□ -1.72
SIX2Q9NPC8 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.32□□□□□ -1.72
SIX2Q9NPC8 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.32□□□□□ -1.72
SIX2Q9NPC8 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SIX2Q9NPC8 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.32□□□□□ -1.72
SIX2Q9NPC8 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SIX2Q9NPC8 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SIX2Q9NPC8 ZNF849P-201ENST00000594711 1566 ntBASIC4.31□□□□□ -1.72
SIX2Q9NPC8 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SIX2Q9NPC8 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SIX2Q9NPC8 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.31□□□□□ -1.72
SIX2Q9NPC8 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SIX2Q9NPC8 RNU5B-1-201ENST00000363286 116 ntBASIC4.31□□□□□ -1.72
SIX2Q9NPC8 RNU4-31P-201ENST00000384211 141 ntBASIC4.31□□□□□ -1.72
SIX2Q9NPC8 RNU6-1320P-201ENST00000390838 107 ntBASIC4.31□□□□□ -1.72
SIX2Q9NPC8 RNU6-1269P-201ENST00000391139 107 ntBASIC4.31□□□□□ -1.72
SIX2Q9NPC8 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.31□□□□□ -1.72
SIX2Q9NPC8 HMGB1P13-201ENST00000406019 642 ntBASIC4.31□□□□□ -1.72
SIX2Q9NPC8 MTCO3P4-201ENST00000419236 787 ntBASIC4.31□□□□□ -1.72
SIX2Q9NPC8 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.31□□□□□ -1.72
SIX2Q9NPC8 ETF1P3-201ENST00000430422 1160 ntBASIC4.31□□□□□ -1.72
SIX2Q9NPC8 AC097499.1-201ENST00000444277 208 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms