Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 MTND5P42-201ENST00000637720 498 ntBASIC5.83□□□□□ -1.48
SSU72Q9NP77 ATP8A2P2-201ENST00000437678 1568 ntBASIC5.83□□□□□ -1.48
SSU72Q9NP77 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSU72Q9NP77 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSU72Q9NP77 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSU72Q9NP77 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSU72Q9NP77 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SSU72Q9NP77 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
SSU72Q9NP77 USP9YP4-201ENST00000424401 1745 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSU72Q9NP77 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSU72Q9NP77 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSU72Q9NP77 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSU72Q9NP77 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSU72Q9NP77 AC025125.1-201ENST00000624743 1922 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 AC002525.1-201ENST00000624392 1622 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSU72Q9NP77 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSU72Q9NP77 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 AC005294.1-201ENST00000355509 281 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 SNORA21-201ENST00000362423 132 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 RNA5SP187-201ENST00000384400 119 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 AL136131.1-201ENST00000406079 803 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 RNU6-1068P-201ENST00000410958 103 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 MTATP6P18-201ENST00000417994 673 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 RPS4XP5-201ENST00000419038 768 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 AC007394.1-201ENST00000421941 531 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 RPL36AP53-201ENST00000432891 316 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 AL606489.2-201ENST00000433886 234 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 AC024082.2-201ENST00000434771 238 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 AL645936.1-201ENST00000441979 518 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 RPS10P18-201ENST00000442662 495 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 LINC02210-201ENST00000444561 288 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSU72Q9NP77 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSU72Q9NP77 RPS3AP50-201ENST00000487064 803 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 AC114324.2-202ENST00000503812 134 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 AC036111.2-201ENST00000533247 901 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 AL121821.2-201ENST00000556081 394 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 AC068714.1-201ENST00000559623 800 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 AC116312.1-201ENST00000606841 314 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 AC073488.6-201ENST00000632293 754 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 MIR1302-1-201ENST00000637932 143 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.82□□□□□ -1.48
SSU72Q9NP77 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSU72Q9NP77 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSU72Q9NP77 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSU72Q9NP77 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSU72Q9NP77 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSU72Q9NP77 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
SSU72Q9NP77 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 AC092376.2-201ENST00000622621 4116 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSU72Q9NP77 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSU72Q9NP77 AC011933.2-201ENST00000578539 2790 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.81□□□□□ -1.48
SSU72Q9NP77 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSU72Q9NP77 MTCO1P11-201ENST00000429111 1528 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 SNORA69-201ENST00000383895 132 ntBASIC5.81□□□□□ -1.48
SSU72Q9NP77 RNU6-1158P-201ENST00000391167 107 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms