Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RNU1-108P-201ENST00000362556 161 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 RNU6-353P-201ENST00000364266 108 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 MIR298-201ENST00000401212 88 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 AL121978.1-201ENST00000402778 359 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 RPS3AP9-201ENST00000417027 792 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 OR51AB1P-201ENST00000429046 620 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 H2AFZP6-201ENST00000444403 394 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 Z77249.1-201ENST00000444622 1175 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 RPL23AP43-201ENST00000446445 471 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 Z99714.1-201ENST00000450463 807 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 AC010469.1-201ENST00000463864 576 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 PRELID3BP7-201ENST00000503606 469 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 KRT19P6-201ENST00000510983 209 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 PTGES3P3-201ENST00000511479 482 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 OR4C2P-201ENST00000530855 1064 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 MTND6P33-201ENST00000571794 183 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 AC010201.1-201ENST00000605051 540 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 AC015813.4-201ENST00000610469 179 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 U73479.1-201ENST00000618062 168 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 MIR7154-201ENST00000620673 73 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 AC010872.1-201ENST00000624225 675 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 SAGE4P-201ENST00000442271 3381 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 A2MP1-204ENST00000566278 4130 ntBASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
NHLRC1Q6VVB1 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 DHX40P1-201ENST00000588725 1412 ntBASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 MTND4P26-201ENST00000415971 1359 ntBASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 ELL2P4-201ENST00000446870 1376 ntBASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 RNU6-1243P-201ENST00000364028 107 ntBASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 Z98745.1-201ENST00000402553 494 ntBASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 GSTA8P-201ENST00000404253 637 ntBASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 ZNF603P-201ENST00000405613 487 ntBASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 RN7SKP106-201ENST00000410832 272 ntBASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 COX6CP15-201ENST00000426313 211 ntBASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 AC010881.1-201ENST00000433830 235 ntBASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 CEACAMP9-201ENST00000442990 513 ntBASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 AC087385.1-201ENST00000475062 312 ntBASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 AC093801.2-201ENST00000503966 1050 ntBASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 AC091860.1-201ENST00000505723 432 ntBASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 AC093755.1-201ENST00000512950 1023 ntBASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.04□□□□□ -1.76
NHLRC1Q6VVB1 AC091178.1-203ENST00000584586 279 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms