Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 ARHGAP42P4-201ENST00000549782 2934 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL8A1P27658 NPL-212ENST00000614468 2376 ntTSL 5 BASIC5.86□□□□□ -1.47
COL8A1P27658 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL8A1P27658 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL8A1P27658 AC011755.1-201ENST00000623763 2049 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL8A1P27658 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL8A1P27658 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
COL8A1P27658 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC5.86□□□□□ -1.47
COL8A1P27658 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.86□□□□□ -1.47
COL8A1P27658 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL8A1P27658 RNU6-552P-201ENST00000362869 119 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 Y_RNA.167-201ENST00000363735 109 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 Y_RNA.424-201ENST00000384063 103 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
COL8A1P27658 HMGB1P17-201ENST00000403495 628 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 MIR1252-201ENST00000408861 65 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.86□□□□□ -1.47
COL8A1P27658 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL8A1P27658 AC092832.1-201ENST00000422934 400 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 OSTCP4-201ENST00000424397 449 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.86□□□□□ -1.47
COL8A1P27658 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.86□□□□□ -1.47
COL8A1P27658 RPL21P2-201ENST00000440049 481 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 UBE2V1P5-201ENST00000440070 405 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 AL450996.1-201ENST00000445574 1202 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.86□□□□□ -1.47
COL8A1P27658 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.86□□□□□ -1.47
COL8A1P27658 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC5.86□□□□□ -1.47
COL8A1P27658 RPL7P43-201ENST00000478876 753 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 GM2AP2-201ENST00000491764 562 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 SUMO2P4-201ENST00000504193 276 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC5.86□□□□□ -1.47
COL8A1P27658 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.86□□□□□ -1.47
COL8A1P27658 IGKV2-19-201ENST00000518132 283 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.86□□□□□ -1.47
COL8A1P27658 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.86□□□□□ -1.47
COL8A1P27658 AP000763.2-201ENST00000540641 163 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.86□□□□□ -1.47
COL8A1P27658 AL118558.2-201ENST00000556294 238 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC5.86□□□□□ -1.47
COL8A1P27658 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.86□□□□□ -1.47
COL8A1P27658 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL8A1P27658 ACTG1P15-201ENST00000570019 1063 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 AC138761.3-201ENST00000579993 334 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.86□□□□□ -1.47
COL8A1P27658 AC090312.1-201ENST00000580637 348 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.86□□□□□ -1.47
COL8A1P27658 AC023043.2-201ENST00000589678 1026 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 GLUD1P4-201ENST00000590914 418 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 AC092447.9-201ENST00000603395 144 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 AL355333.1-201ENST00000605632 279 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 PISRT1.1-201ENST00000616930 107 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.86□□□□□ -1.47
COL8A1P27658 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.86□□□□□ -1.47
COL8A1P27658 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL8A1P27658 OR52B5P-204ENST00000641744 3467 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL8A1P27658 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC5.86□□□□□ -1.47
COL8A1P27658 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC5.86□□□□□ -1.47
COL8A1P27658 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
COL8A1P27658 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
COL8A1P27658 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL8A1P27658 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL8A1P27658 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL8A1P27658 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
COL8A1P27658 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
COL8A1P27658 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL8A1P27658 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL8A1P27658 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
COL8A1P27658 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
COL8A1P27658 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC5.86□□□□□ -1.47
COL8A1P27658 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL8A1P27658 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL8A1P27658 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC5.86□□□□□ -1.47
COL8A1P27658 MAPK10-270ENST00000641102 3538 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.86□□□□□ -1.47
COL8A1P27658 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
COL8A1P27658 AL391262.1-201ENST00000556558 1992 ntBASIC5.86□□□□□ -1.47
COL8A1P27658 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL8A1P27658 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
COL8A1P27658 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL8A1P27658 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL8A1P27658 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL8A1P27658 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
COL8A1P27658 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC5.85□□□□□ -1.47
COL8A1P27658 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
COL8A1P27658 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
COL8A1P27658 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
COL8A1P27658 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.85□□□□□ -1.47
COL8A1P27658 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL8A1P27658 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC5.85□□□□□ -1.47
COL8A1P27658 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.85□□□□□ -1.47
COL8A1P27658 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL8A1P27658 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL8A1P27658 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL8A1P27658 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
COL8A1P27658 RNU6-1252P-201ENST00000363054 104 ntBASIC5.85□□□□□ -1.47
COL8A1P27658 Y_RNA.106-201ENST00000363189 100 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms