Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.59□□□□□ -1.67
TOP1P11387 AC006130.2-201ENST00000586202 326 ntBASIC4.59□□□□□ -1.67
TOP1P11387 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.59□□□□□ -1.67
TOP1P11387 AL161637.1-201ENST00000622380 412 ntBASIC4.59□□□□□ -1.67
TOP1P11387 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TOP1P11387 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TOP1P11387 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.58□□□□□ -1.68
TOP1P11387 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.58□□□□□ -1.68
TOP1P11387 LINC02471-203ENST00000641941 4752 ntBASIC4.58□□□□□ -1.68
TOP1P11387 AL136964.1-201ENST00000622038 2990 ntBASIC4.58□□□□□ -1.68
TOP1P11387 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TOP1P11387 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TOP1P11387 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.58□□□□□ -1.68
TOP1P11387 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
TOP1P11387 RN7SKP44-201ENST00000363602 316 ntBASIC4.58□□□□□ -1.68
TOP1P11387 RNA5SP97-201ENST00000365006 84 ntBASIC4.58□□□□□ -1.68
TOP1P11387 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.58□□□□□ -1.68
TOP1P11387 RN7SKP159-201ENST00000410657 292 ntBASIC4.58□□□□□ -1.68
TOP1P11387 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.58□□□□□ -1.68
TOP1P11387 AC011742.1-201ENST00000431448 434 ntBASIC4.58□□□□□ -1.68
TOP1P11387 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.58□□□□□ -1.68
TOP1P11387 MTCYBP12-201ENST00000440559 1134 ntBASIC4.58□□□□□ -1.68
TOP1P11387 VN1R25P-201ENST00000443385 738 ntBASIC4.58□□□□□ -1.68
TOP1P11387 RANP8-201ENST00000444720 713 ntBASIC4.58□□□□□ -1.68
TOP1P11387 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.58□□□□□ -1.68
TOP1P11387 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.58□□□□□ -1.68
TOP1P11387 AL645939.1-201ENST00000453429 797 ntBASIC4.58□□□□□ -1.68
TOP1P11387 VN1R40P-201ENST00000455196 941 ntBASIC4.58□□□□□ -1.68
TOP1P11387 AL133477.1-201ENST00000457472 514 ntBASIC4.58□□□□□ -1.68
TOP1P11387 AC069499.1-201ENST00000489433 509 ntBASIC4.58□□□□□ -1.68
TOP1P11387 RN7SL323P-201ENST00000494712 295 ntBASIC4.58□□□□□ -1.68
TOP1P11387 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.58□□□□□ -1.68
TOP1P11387 AL139099.1-201ENST00000497398 403 ntBASIC4.58□□□□□ -1.68
TOP1P11387 AC109458.1-201ENST00000508858 316 ntBASIC4.58□□□□□ -1.68
TOP1P11387 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.58□□□□□ -1.68
TOP1P11387 AC022790.1-201ENST00000522872 204 ntBASIC4.58□□□□□ -1.68
TOP1P11387 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.58□□□□□ -1.68
TOP1P11387 CYCSP30-201ENST00000546447 172 ntBASIC4.58□□□□□ -1.68
TOP1P11387 GNRHR2P1-201ENST00000555315 631 ntBASIC4.58□□□□□ -1.68
TOP1P11387 AL360157.1-201ENST00000565962 87 ntBASIC4.58□□□□□ -1.68
TOP1P11387 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TOP1P11387 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.58□□□□□ -1.68
TOP1P11387 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.58□□□□□ -1.68
TOP1P11387 HMGB1P51-201ENST00000605166 638 ntBASIC4.58□□□□□ -1.68
TOP1P11387 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.58□□□□□ -1.68
TOP1P11387 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.58□□□□□ -1.68
TOP1P11387 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.58□□□□□ -1.68
TOP1P11387 FP236240.3-201ENST00000623061 327 ntBASIC4.58□□□□□ -1.68
TOP1P11387 AL359715.5-201ENST00000623431 443 ntBASIC4.58□□□□□ -1.68
TOP1P11387 AC073530.2-201ENST00000623987 261 ntBASIC4.58□□□□□ -1.68
TOP1P11387 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TOP1P11387 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
TOP1P11387 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.57□□□□□ -1.68
TOP1P11387 AC017007.4-201ENST00000503353 1352 ntBASIC4.57□□□□□ -1.68
TOP1P11387 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.57□□□□□ -1.68
TOP1P11387 RN7SKP202-201ENST00000410439 330 ntBASIC4.57□□□□□ -1.68
TOP1P11387 CYCSP19-201ENST00000411715 316 ntBASIC4.57□□□□□ -1.68
TOP1P11387 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.57□□□□□ -1.68
TOP1P11387 AL391219.1-201ENST00000422570 483 ntBASIC4.57□□□□□ -1.68
TOP1P11387 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TOP1P11387 AL356535.1-201ENST00000440335 398 ntBASIC4.57□□□□□ -1.68
TOP1P11387 AL157827.1-201ENST00000447622 132 ntBASIC4.57□□□□□ -1.68
TOP1P11387 RPL31P61-201ENST00000496160 376 ntBASIC4.57□□□□□ -1.68
TOP1P11387 AC023050.1-201ENST00000498198 304 ntBASIC4.57□□□□□ -1.68
TOP1P11387 AC021146.7-201ENST00000509604 775 ntBASIC4.57□□□□□ -1.68
TOP1P11387 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.57□□□□□ -1.68
TOP1P11387 RNU6-352P-201ENST00000516908 107 ntBASIC4.57□□□□□ -1.68
TOP1P11387 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.57□□□□□ -1.68
TOP1P11387 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.57□□□□□ -1.68
TOP1P11387 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.57□□□□□ -1.68
TOP1P11387 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.57□□□□□ -1.68
TOP1P11387 AC107016.1-201ENST00000550463 337 ntBASIC4.57□□□□□ -1.68
TOP1P11387 AL161713.1-201ENST00000555538 145 ntBASIC4.57□□□□□ -1.68
TOP1P11387 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.57□□□□□ -1.68
TOP1P11387 MIR4458-201ENST00000578872 75 ntBASIC4.57□□□□□ -1.68
TOP1P11387 AC107982.3-201ENST00000584957 985 ntBASIC4.57□□□□□ -1.68
TOP1P11387 AP000255.1-201ENST00000610276 676 ntBASIC4.57□□□□□ -1.68
TOP1P11387 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TOP1P11387 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
TOP1P11387 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
TOP1P11387 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
TOP1P11387 SAGE2P-201ENST00000420011 2126 ntBASIC4.57□□□□□ -1.68
TOP1P11387 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
TOP1P11387 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TOP1P11387 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.56□□□□□ -1.68
TOP1P11387 AL359715.4-201ENST00000606629 1436 ntBASIC4.56□□□□□ -1.68
TOP1P11387 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TOP1P11387 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TOP1P11387 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.56□□□□□ -1.68
TOP1P11387 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
TOP1P11387 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
TOP1P11387 OR11H5P-202ENST00000641612 1325 ntBASIC4.56□□□□□ -1.68
TOP1P11387 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TOP1P11387 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TOP1P11387 MIR30B-201ENST00000384850 88 ntBASIC4.56□□□□□ -1.68
TOP1P11387 AL691447.1-201ENST00000419456 387 ntBASIC4.56□□□□□ -1.68
TOP1P11387 AC087650.1-201ENST00000431445 468 ntBASIC4.56□□□□□ -1.68
TOP1P11387 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.56□□□□□ -1.68
TOP1P11387 RRM2P4-201ENST00000441721 562 ntBASIC4.56□□□□□ -1.68
TOP1P11387 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms