Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AL512413.1-201ENST00000606489 382 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 AL627309.6-201ENST00000606857 840 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 AC131902.3-201ENST00000611767 581 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 BANCR-201ENST00000624238 473 ntTSL 2 BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 AL353743.1-202ENST00000431724 1695 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 RNF19BPY-201ENST00000458209 1550 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 RNU6-600P-201ENST00000362524 99 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 RNA5SP510-201ENST00000364697 99 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 RNU6-356P-201ENST00000384140 107 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 RNA5SP284-201ENST00000384547 118 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 MIR1275-201ENST00000408770 80 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 EI24P1-201ENST00000416584 867 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 RPL7P10-201ENST00000417407 739 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 BX510359.2-201ENST00000417920 305 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AL513174.1-201ENST00000423182 629 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 NFYAP1-201ENST00000431953 972 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AC073648.4-201ENST00000442655 781 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AL157884.3-201ENST00000448273 1184 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 RPL36AP33-201ENST00000450395 310 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 KF459542.1-201ENST00000450908 553 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 FCF1P7-201ENST00000451185 558 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AC144530.1-201ENST00000452862 555 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AC099563.1-201ENST00000456086 418 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 OR6K1P-201ENST00000456766 971 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 RPS20P4-201ENST00000461659 355 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 RPS4XP1-201ENST00000482189 787 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 ARL4AP2-201ENST00000507378 601 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AC147055.1-201ENST00000509261 750 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AF279873.1-201ENST00000523393 313 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AC022655.2-201ENST00000577280 318 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 BNIP3P38-201ENST00000601117 544 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 VN1R81P-201ENST00000602085 372 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AL163642.2-201ENST00000604722 1019 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AC005084.1-201ENST00000605160 304 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AC009163.6-201ENST00000612367 342 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AC243654.2-201ENST00000612843 443 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AL390240.1-201ENST00000612950 384 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 MIR6883-201ENST00000614952 78 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 uc_338.13-201ENST00000618243 179 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AC008115.4-201ENST00000619780 775 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AP002799.1-201ENST00000623552 423 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AL683826.1-201ENST00000624104 627 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AC007823.1-201ENST00000569932 1566 ntBASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2□□□□□ -2.09
CHKB-CPT1BH3BT56 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 ODF3-202ENST00000342593 386 ntTSL 5 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 Y_RNA.209-201ENST00000364156 111 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 U3.11-201ENST00000364476 212 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 RNU1-101P-201ENST00000391171 127 ntBASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 CCL7-202ENST00000394627 696 ntTSL 3 BASIC1.99□□□□□ -2.09
CHKB-CPT1BH3BT56 RPL21P3-201ENST00000395517 478 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms