Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MRPL50P1-201ENST00000431951 384 ntBASIC3.65□□□□□ -1.83
VAPAQ9P0L0 USP9YP7-201ENST00000436723 430 ntBASIC3.65□□□□□ -1.83
VAPAQ9P0L0 SKP1P1-201ENST00000438081 489 ntBASIC3.65□□□□□ -1.83
VAPAQ9P0L0 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 USP9YP32-201ENST00000452432 430 ntBASIC3.65□□□□□ -1.83
VAPAQ9P0L0 MTCO3P20-201ENST00000454926 688 ntBASIC3.65□□□□□ -1.83
VAPAQ9P0L0 AC087385.1-201ENST00000475062 312 ntBASIC3.65□□□□□ -1.83
VAPAQ9P0L0 AC007686.1-201ENST00000488511 463 ntBASIC3.65□□□□□ -1.83
VAPAQ9P0L0 RPS23P1-201ENST00000491662 432 ntBASIC3.65□□□□□ -1.83
VAPAQ9P0L0 AC021087.2-201ENST00000504656 1203 ntBASIC3.65□□□□□ -1.83
VAPAQ9P0L0 AC093840.1-201ENST00000511599 336 ntBASIC3.65□□□□□ -1.83
VAPAQ9P0L0 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 RN7SKP83-201ENST00000516512 178 ntBASIC3.65□□□□□ -1.83
VAPAQ9P0L0 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 AP003730.1-201ENST00000524605 285 ntBASIC3.65□□□□□ -1.83
VAPAQ9P0L0 OR4V1P-201ENST00000525394 1140 ntBASIC3.65□□□□□ -1.83
VAPAQ9P0L0 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 MIR4277-201ENST00000578298 84 ntBASIC3.65□□□□□ -1.83
VAPAQ9P0L0 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 MIR3138-201ENST00000585238 82 ntBASIC3.65□□□□□ -1.83
VAPAQ9P0L0 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 NF1P5-201ENST00000588287 448 ntBASIC3.65□□□□□ -1.83
VAPAQ9P0L0 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 AC083899.3-201ENST00000603413 594 ntBASIC3.65□□□□□ -1.83
VAPAQ9P0L0 AL049844.2-201ENST00000604280 628 ntBASIC3.65□□□□□ -1.83
VAPAQ9P0L0 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.65□□□□□ -1.83
VAPAQ9P0L0 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 MIR199A2-201ENST00000385289 110 ntBASIC3.64□□□□□ -1.83
VAPAQ9P0L0 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.64□□□□□ -1.83
VAPAQ9P0L0 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 EIF2S2P2-201ENST00000447161 982 ntBASIC3.64□□□□□ -1.83
VAPAQ9P0L0 CYCSP42-201ENST00000450823 238 ntBASIC3.64□□□□□ -1.83
VAPAQ9P0L0 MTCO3P16-201ENST00000454456 754 ntBASIC3.64□□□□□ -1.83
VAPAQ9P0L0 NDUFB4P9-201ENST00000511646 388 ntBASIC3.64□□□□□ -1.83
VAPAQ9P0L0 NDUFA5P2-201ENST00000519723 344 ntBASIC3.64□□□□□ -1.83
VAPAQ9P0L0 AC022790.1-201ENST00000522872 204 ntBASIC3.64□□□□□ -1.83
VAPAQ9P0L0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 OR4A12P-201ENST00000530847 918 ntBASIC3.64□□□□□ -1.83
VAPAQ9P0L0 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 AC068790.4-201ENST00000602474 263 ntBASIC3.64□□□□□ -1.83
VAPAQ9P0L0 AL137849.1-201ENST00000604767 169 ntBASIC3.64□□□□□ -1.83
VAPAQ9P0L0 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 AL445567.2-201ENST00000618935 498 ntBASIC3.64□□□□□ -1.83
VAPAQ9P0L0 AC073530.2-201ENST00000623987 261 ntBASIC3.64□□□□□ -1.83
VAPAQ9P0L0 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 OR5AC4P-202ENST00000642086 985 ntBASIC3.64□□□□□ -1.83
VAPAQ9P0L0 AC100871.1-201ENST00000507871 1456 ntBASIC3.64□□□□□ -1.83
VAPAQ9P0L0 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VAPAQ9P0L0 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.63□□□□□ -1.83
VAPAQ9P0L0 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
VAPAQ9P0L0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
VAPAQ9P0L0 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
VAPAQ9P0L0 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.63□□□□□ -1.83
VAPAQ9P0L0 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
VAPAQ9P0L0 MIR423-201ENST00000362201 94 ntBASIC3.63□□□□□ -1.83
VAPAQ9P0L0 U3.15-201ENST00000365398 212 ntBASIC3.63□□□□□ -1.83
VAPAQ9P0L0 RNU6-31P-201ENST00000384388 108 ntBASIC3.63□□□□□ -1.83
VAPAQ9P0L0 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.63□□□□□ -1.83
VAPAQ9P0L0 OR8G2P-201ENST00000412796 908 ntBASIC3.63□□□□□ -1.83
VAPAQ9P0L0 AL159169.1-201ENST00000421119 127 ntBASIC3.63□□□□□ -1.83
VAPAQ9P0L0 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.63□□□□□ -1.83
VAPAQ9P0L0 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.63□□□□□ -1.83
VAPAQ9P0L0 AC068287.1-201ENST00000430283 295 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms