Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 AC069213.2-201ENST00000420238 366 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 AC007064.3-201ENST00000422608 359 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 OR5AW1P-201ENST00000426334 1006 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 AL365396.1-201ENST00000430854 671 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 RPS24P8-201ENST00000431490 402 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 SETP5-201ENST00000437270 562 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 AC105402.2-201ENST00000438503 358 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 AC239367.2-201ENST00000447309 705 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 RPL31P20-201ENST00000449593 360 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 MTND2P8-201ENST00000450555 1025 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 OR2AF1P-201ENST00000454899 889 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 RN7SL604P-201ENST00000492589 296 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 SNORD116-30-201ENST00000516468 85 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 SOD1P3-201ENST00000518682 454 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 AL133457.1-201ENST00000564251 987 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 AC027281.1-201ENST00000574178 758 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 AL133247.2-201ENST00000603236 482 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 BRDTP1-201ENST00000605735 677 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 ASNSP1-204ENST00000641977 1664 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 AC006504.1-201ENST00000562493 3666 ntBASIC3.2□□□□□ -1.9
CTNNBIP1Q9NSA3 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 CEP170P1-201ENST00000502249 4587 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 SNORA70E-201ENST00000384492 135 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 ATP5F1P4-201ENST00000397288 746 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 HSPE1P8-201ENST00000406997 288 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 Z98941.1-201ENST00000407764 100 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 HSPE1P12-201ENST00000412576 301 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 AL049610.1-201ENST00000423374 372 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 BTF3P10-201ENST00000433415 495 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 MTCYBP31-201ENST00000438855 1122 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 RN7SL330P-201ENST00000469709 307 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 RN7SL738P-201ENST00000470264 297 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 RN7SL860P-201ENST00000473738 223 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 RPS23P1-201ENST00000491662 432 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 NDUFA5P12-201ENST00000503796 343 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 AC110792.2-201ENST00000510278 224 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 AC091516.1-201ENST00000549191 703 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 PSMB7P1-201ENST00000556349 514 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 AC010928.3-201ENST00000587712 541 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 AC006254.3-201ENST00000603353 884 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 AC022079.2-201ENST00000619739 566 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 AC007342.8-201ENST00000623278 678 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 ATE1-AS1-202ENST00000636460 506 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 AL157700.1-201ENST00000561973 1432 ntBASIC3.19□□□□□ -1.9
CTNNBIP1Q9NSA3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.18□□□□□ -1.9
CTNNBIP1Q9NSA3 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTNNBIP1Q9NSA3 RNA5SP447-201ENST00000363749 119 ntBASIC3.18□□□□□ -1.9
CTNNBIP1Q9NSA3 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.18□□□□□ -1.9
CTNNBIP1Q9NSA3 RPL37P18-201ENST00000411602 243 ntBASIC3.18□□□□□ -1.9
CTNNBIP1Q9NSA3 RHEBP3-201ENST00000411920 351 ntBASIC3.18□□□□□ -1.9
CTNNBIP1Q9NSA3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.18□□□□□ -1.9
CTNNBIP1Q9NSA3 AC108032.1-201ENST00000416706 207 ntBASIC3.18□□□□□ -1.9
CTNNBIP1Q9NSA3 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CTNNBIP1Q9NSA3 OR5BE1P-201ENST00000425977 939 ntBASIC3.18□□□□□ -1.9
CTNNBIP1Q9NSA3 AC006455.6-201ENST00000426192 893 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms